Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4044 |
Symbol | relA |
ID | 6972047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3738213 |
End bp | 3740447 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643387806 |
Product | GDP/GTP pyrophosphokinase |
Protein accession | YP_002272249 |
Protein GI | 209400075 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000409177 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.332873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCGG TAAGAAGTGC ACATATCAAT AAGGCTGGTG AATTTGATCC GGAAAAATGG ATCGCAAGTC TGGGTATTAC CAGCCAGAAG TCGTGTGAGT GCTTAGCCGA AACCTGGGCG TATTGTCTGC AACAGACGCA GGGGCATCCG GATGCCAGTC TGTTATTGTG GCGTGGTGTT GAGATGGTGG AGATCCTCTC GACATTAAGT ATGGACATTG ACACGCTGCG GGCGGCGCTG CTGTTCCCTC TGGCTGATGC CAACGTAGTC AGCGAAGATG TGCTGCGTGA GAGCGTCGGT AAGTCGGTCG TTAACCTTAT TCACGGCGTG CGTGATATGG CGGCGATCCG CCAGCTGAAA GCGACGCACA CTGATTCTGT TTCCTCCGAA CAGGTCGATA ACGTTCGCCG GATGTTATTG GCGATGGTCG ATGATTTTCG CTGCGTGGTC ATCAAACTGG CGGAGCGTAT TGCTCATCTG CGTGAAGTAA AAGATGCGCC GGAAGATGAA CGCGTACTGG CGGCAAAAGA GTGCACCAAT ATCTACGCGC CGTTGGCAAA CCGTCTTGGG ATTGGGCAAC TGAAATGGGA GCTGGAAGAT TACTGCTTCC GTTATCTCCA CCCGACCGAA TACAAACGCA TCGCAAAACT GTTGCATGAA CGCCGTCTCG ACCGCGAACA CTATATCGAA GAGTTTGTCG GTCATCTGCG CGCTGAGATG AAAGCTGAAG GCGTTAAAGC TGAAGTGTAT GGTCGTCCGA AACACATCTA CAGCATCTGG CGCAAAATGC AGAAAAAGAA CCTCGCCTTC GATGAGCTGT TTGATGTGCG TGCGGTACGT ATTGTCGCCG AGCGTTTACA GGATTGTTAT GCCGCACTGG GGATAGTGCA CACTCACTAT CGCCACCTGC CGGATGAGTT TGACGATTAC GTCGCTAACC CGAAACCAAA CGGTTATCAG TCTATTCATA CCGTGGTTCT GGGGCCGGGT GGAAAAACCG TTGAGATCCA AATCCGCACC AAACAGATGC ATGAAGATGC AGAGTTGGGT GTTGCTGCGC ACTGGAAATA TAAAGAGGGC GCGGCTGCTG GCGGCGCACG TTCGGGACAT GAAGACCGGA TTGCCTGGCT GCGTAAACTG ATTGCGTGGC AGGAAGAGAT GGCTGATTCC GGCGAAATGC TCGACGAAGT ACGCAGCCAG GTCTTTGACG ACCGGGTGTA CGTCTTTACG CCTAAAGGTG ATGTCGTTGA TTTGCCTGCG GGATCAACGC CGCTGGACTT CGCTTACCAC ATCCACAGTG ATGTCGGACA CCGCTGTATC GGGGCAAAAA TTGGCGGGCG CATTGTGCCG TTCACCTACC AGCTGCAAAT GGGCGACCAG ATTGAAATTA TCACCCAGAA ACAGCCGAAC CCCAGCCGTG ACTGGTTAAA CCCAAACCTC GGTTACGTCA CAACCAGCCG TGGGCGTTCG AAAATTCACG CCTGGTTCCG TAAACAGGAC CGTGACAAAA ACATTCTGGC TGGGCGGCAA ATCCTTGACG ACGAGCTGGA ACATCTGGGG ATCAGCCTGA AAGAAGCAGA AAAACATCTG CTGCCGCGTT ACAACTTCAA TGATGTCGAC GAGTTGCTGG CGGCGATTGG TGGCGGGGAT ATCCGTCTCA ATCAGATGGT GAACTTCCTG CAATCGCAAT TTAATAAGCC GAGTGCCGAA GAGCAGGACG CCGCCGCGCT GAAACAGCTT CAGCAAAAAA GCTACACGCC GCAAAACCGC AGTAAAGATA ACGGTCGTGT AGTGGTTGAA GGTGTTGGTA ACCTGATGCA CCACATCGCG CGCTGCTGCC AGCCGATTCC TGGAGATGAG ATTGTCGGCT TCATTACCCA GGGACGCGGT ATTTCAGTAC ACCGCGCCGA TTGCGAACAA CTGGCGGAAC TGCGCTCCCA TGCGCCAGAA CGCATTGTTG ACGCGGTATG GGGTGAGAGC TACTCCGCCG GATATTCGCT GGTGGTCCGC GTGGTGGCTA ATGATCGTAG TGGGTTGTTA CGTGATATCA CGACCATTCT CGCCAACGAG AAGGTGAACG TGCTTGGCGT TGCCAGCCGT AGCGACACCA AACAGCAACT GGCGACCATC GACATGACCA TTGAGATTTA CAACCTGCAA GTGCTGGGGC GCGTGCTGGG TAAACTCAAC CAGGTGCCGG ATGTTATCGA CGCGCGTCGG TTGCACGGGA GTTAG
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Protein sequence | MVAVRSAHIN KAGEFDPEKW IASLGITSQK SCECLAETWA YCLQQTQGHP DASLLLWRGV EMVEILSTLS MDIDTLRAAL LFPLADANVV SEDVLRESVG KSVVNLIHGV RDMAAIRQLK ATHTDSVSSE QVDNVRRMLL AMVDDFRCVV IKLAERIAHL REVKDAPEDE RVLAAKECTN IYAPLANRLG IGQLKWELED YCFRYLHPTE YKRIAKLLHE RRLDREHYIE EFVGHLRAEM KAEGVKAEVY GRPKHIYSIW RKMQKKNLAF DELFDVRAVR IVAERLQDCY AALGIVHTHY RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTVEIQIRT KQMHEDAELG VAAHWKYKEG AAAGGARSGH EDRIAWLRKL IAWQEEMADS GEMLDEVRSQ VFDDRVYVFT PKGDVVDLPA GSTPLDFAYH IHSDVGHRCI GAKIGGRIVP FTYQLQMGDQ IEIITQKQPN PSRDWLNPNL GYVTTSRGRS KIHAWFRKQD RDKNILAGRQ ILDDELEHLG ISLKEAEKHL LPRYNFNDVD ELLAAIGGGD IRLNQMVNFL QSQFNKPSAE EQDAAALKQL QQKSYTPQNR SKDNGRVVVE GVGNLMHHIA RCCQPIPGDE IVGFITQGRG ISVHRADCEQ LAELRSHAPE RIVDAVWGES YSAGYSLVVR VVANDRSGLL RDITTILANE KVNVLGVASR SDTKQQLATI DMTIEIYNLQ VLGRVLGKLN QVPDVIDARR LHGS
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