| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4008 |
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| Symbol | cas1 |
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| ID | 6968155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3703218 |
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| End bp | 3704141 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643387776 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002272219 |
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| Protein GI | 209397933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGTTTG TACCACTGAG TCCGATCCCG TTAAAAGATC GCACCTCTAT GATCTTCCTC
CAGTACGGTC AAATCGACGT ACTGGACGGC GCTTTCGTGC TGATCGACAA AACCGGGATC
CGCACGCACA TTCCGGTGGG ATCGGTCGCC TGCATTATGC TCGAACCGGG AACGAGAGTT
TCCCACGCGG CGGTGCATCT GGCCGCCACG GTGGGAACAC TGCTGGTCTG GGTCGGTGAA
GCGGGCGTTC GCGTTTACTC TTCCGGACAA CCCGGAGGGG CGCGGGCAGA TAAATTACTC
TACCAGGCAA AGCTGGCTTT AACGGAAGAT CTACGCCTGA AGGTGGTGCG CAAAATGTAT
GAATTACGTT TTCGTGAGCC ACCGCCAGCT CGCCGTTCAG TGGATCAGCT ACGGGGAATT
GAGGGATCCC GCGTTCGCCA GACCTATGCA TTACTGGCGA AACAATATGG TGTGAAATGG
AATGGTCGCA AATACGATCC TAAAGACTGG GAAAAAGGCG ATGTTGTGAA TCGCTGCATC
AGTGCTGCCA CATCATGTCT GTACGGTATT TCTGAAGCGG CAGTATTAGC CGCGGGATAT
GCGCCCGCTA TTGGATTTAT TCATAGTGGC AAACCGCTTT CATTTGTTTA TGACATAGCC
GATATCATTA AATTTGATTC GGTTGTGCCA AAGGCATTTG AAATAGCAGC GAGGCAACCC
GCAGAACCTG ATAAAGAAGT CAGATTAGCC TGTCGCGATA TTTTCCGTAG CACTAAGTTA
ACGGGCAAAT TAATACCGTT AATTGAGAAA GTCCTTGCTG CAGGTGAAAT TGAACCACCA
CAACCCGCGC CGGATATGTT ACCGCCTGCC ATCCCTGAAC CTGAAACGCT GGGTGATAGT
GGTCACCGGG GGCGCGGCGG ATGA
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| Protein sequence | MTFVPLSPIP LKDRTSMIFL QYGQIDVLDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV
SHAAVHLAAT VGTLLVWVGE AGVRVYSSGQ PGGARADKLL YQAKLALTED LRLKVVRKMY
ELRFREPPPA RRSVDQLRGI EGSRVRQTYA LLAKQYGVKW NGRKYDPKDW EKGDVVNRCI
SAATSCLYGI SEAAVLAAGY APAIGFIHSG KPLSFVYDIA DIIKFDSVVP KAFEIAARQP
AEPDKEVRLA CRDIFRSTKL TGKLIPLIEK VLAAGEIEPP QPAPDMLPPA IPEPETLGDS
GHRGRGG
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