| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3993 |
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| Symbol | nlpD |
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| ID | 6966757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3692582 |
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| End bp | 3693673 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643387762 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_002272205 |
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| Protein GI | 209400494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG GAAGCCCAAA ATTCACCGTT CGCCGCATTG CGGCTTTGTC ACTGGTTTCG
CTATGGCTGG CAGGCTGTTC TGACACTTCA AATCCACCGG CACCGGTCAG CTCCGTTAAT
GGCAATGCGC CTGCACATAC CAATTCTGGT ATGTTGATTA CGCCGCCGCC GAAAATGGGG
ACGACGTCTA CAGCGCAGCA ACCGCAAATC CAGCCAGTGC AGCCAGTAGC TCAGCAGCCG
GTACAGATGG AAAACGGACG CATCGTCTAT AACCGTCAGT ATGGGAACAT TCCGAAAGGC
AGTTATAGCG GCAGTACCTA TACCGTGAAA AAAGGCGACA CGCTTTTCTA TATCGCCTGG
ATTACTGGCA ACGATTTCCG TGACCTTGCT CAGCGCAACA ATATTCAGGC ACCATACGCG
CTGAACGTCG GTCAGACCTT ACAGGTGGGT AATGCTTCCG GTACGCCAAT CACTGGCGGA
AATGCCATTA CCCAGGCCGA CGCAGCAGAG CAAGGAGTTG TGATCAAGCC TGCACAAAAT
TCCACCGTTG CTGTTGCGTC GCAACCGACA ATTACGTATT CTGAGTCTTC GGGTGAACAG
AGTGCTAACA AAATGTTGCC GAACAACAAG CCAACTGCGA CCACGGTCAC AGCGCCTGTA
ACGGTACCAA CAGCAAGCAC AACCGAGCCG ACTGTCAGCA GTACATCAAC CAGTACGCCT
ATCTCCACCT GGCGCTGGCC GACTGAGGGC AAAGTGATCG AAACCTTTGG CGCTTCTGAG
GGGGGCAACA AGGGGATTGA TATCGCAGGC AGCAAAGGAC AGGCAATTAT CGCGACCGCA
GATGGCCGTG TTGTTTATGC CGGTAACGCG CTGCGCGGCT ACGGTAATCT GATTATCATC
AAACATAATG ATGATTACCT GAGTGCCTAC GCCCATAACG ACACAATGCT GGTCCGGGAA
CAACAAGAAG TGAAGGCGGG GCAAAAAATA GCAACCATGG GTAGCACCGG AACCAGTTCA
ACACGCTTGC ATTTTGAAAT TCGTTACAAG GGGAAATCCG TAAACCCGCT GCGTTATTTG
CCGCAGCGAT AA
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| Protein sequence | MSAGSPKFTV RRIAALSLVS LWLAGCSDTS NPPAPVSSVN GNAPAHTNSG MLITPPPKMG
TTSTAQQPQI QPVQPVAQQP VQMENGRIVY NRQYGNIPKG SYSGSTYTVK KGDTLFYIAW
ITGNDFRDLA QRNNIQAPYA LNVGQTLQVG NASGTPITGG NAITQADAAE QGVVIKPAQN
STVAVASQPT ITYSESSGEQ SANKMLPNNK PTATTVTAPV TVPTASTTEP TVSSTSTSTP
ISTWRWPTEG KVIETFGASE GGNKGIDIAG SKGQAIIATA DGRVVYAGNA LRGYGNLIII
KHNDDYLSAY AHNDTMLVRE QQEVKAGQKI ATMGSTGTSS TRLHFEIRYK GKSVNPLRYL
PQR
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