Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3981 |
Symbol | hypD |
ID | 6969187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3680265 |
End bp | 3681386 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643387750 |
Product | hydrogenase expression/formation protein HypD |
Protein accession | YP_002272193 |
Protein GI | 209396571 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0409] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTG TTGATGAATA TCGCGCGCCG GAACAGGTGA TGCAGTTAAT TGAGCATCTG CGCGAACGTG CTTCACATCT CTCTTACACC GCCGAACGCC CTCTGCGGAT TATGGAAGTG TGCGGTGGTC ATACCCACGC CATTTTTAAA TTCGGCCTCG ACCAGTTACT GCCTGAAAAC GTTGAGTTTA TCCACGGTCC GGGTTGCCCG GTGTGCGTAC TGCCGATGGG CAGAATCGAC ACCTGCGTGG AGATTGCCAG CCATCCGGAA GTCATCTTCT GTACCTTTGG CGACGCCATG CGCGTGCCGG GGAAACAGGG ATCGCTGTTG CAGGCAAAAG CACGCGGTGC CGATGTGCGC ATCGTCTATT CGCCGATGGA TGCGTTGAAA CTGGCGCAGG AGAATCCAAC CCGCAAAGTG GTGTTCTTCG GCTTAGGTTT TGAAACCACC ATGCCGACCA CCGCCATCAC TCTGCAACAG GCGAAAGCGC GTGATGTGCA GAATTTTTAC TTCTTCTGCC AGCATATTAC GCTTATCCCG ACGCTGCGCA GTTTGCTGGA ACAGCCGGAT AACGGTATCG ACGCGTTCCT CGCGCCGGGC CACGTTAGTA TGGTTATCGG CACTGATGCC TATAATTTTA TCGCCAGCGA TTTTCAGCGT CCGCTGGTGG TGGCTGGTTT CGAACCCCTT GATCTACTGC AAGGCGTGGT CATGCTGGTG GAGCAGAAAA TAGCGGCCCA CAGCAAGGTA GAGAATCAGT ATCGTCGGGT GGTACCGGAT GCCGGTAACC TGCTGGCGCA ACAGGCGATT GCCGATGTGT TCTGTGTCAA CGGCGACAGC GAATGGCGCG GCTTAGGCGT GATTGAATCT TCTGGCGTGC ACCTGACGCC GGATTATCAA CGATTCGATG CCGAAGCACA TTTCCGCCCG GCACCGCAGC AGGTCTGCGA TGACCCGCGC GCGCGTTGTG GCGAAGTCTT GACGGGCAAA TGTAAGCCGC ATCAATGCCC GCTGTTTGGT AACACCTGTA ATCCTCAAAC CGCGTTTGGT GCGCTGATGG TTTCCTCCGA AGGAGCGTGC GCCGCGTGGT ATCAGTATCG TCAGCAGGAG AGTGAAGCGT GA
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Protein sequence | MRFVDEYRAP EQVMQLIEHL RERASHLSYT AERPLRIMEV CGGHTHAIFK FGLDQLLPEN VEFIHGPGCP VCVLPMGRID TCVEIASHPE VIFCTFGDAM RVPGKQGSLL QAKARGADVR IVYSPMDALK LAQENPTRKV VFFGLGFETT MPTTAITLQQ AKARDVQNFY FFCQHITLIP TLRSLLEQPD NGIDAFLAPG HVSMVIGTDA YNFIASDFQR PLVVAGFEPL DLLQGVVMLV EQKIAAHSKV ENQYRRVVPD AGNLLAQQAI ADVFCVNGDS EWRGLGVIES SGVHLTPDYQ RFDAEAHFRP APQQVCDDPR ARCGEVLTGK CKPHQCPLFG NTCNPQTAFG ALMVSSEGAC AAWYQYRQQE SEA
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