| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3962 |
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| Symbol | hypF |
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| ID | 6970084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3663337 |
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| End bp | 3665637 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643387731 |
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| Product | carbamoyltransferase HypF |
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| Protein accession | YP_002272174 |
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| Protein GI | 209397726 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGCT GGACGGGTTA CGCAATTCAT GATGGCGGGA ATAACTCAAT GGCAAAAAAC
ACATCTTGCG GTGTCCAACT GCGTATTCGA GGCAAAGTGC AGGGCGTCGG TTTTCGTCCG
TTTGTCTGGC AGCTGGCACA GCAATTAAAT CTTCACGGCG ATGTCTGTAA TGACGGCGAT
GGCGTAGAAG TCCGGCTGCT GGAAGACCCG GAAACGTTTC TTGTTCAATT GCATCAGCAC
TGCCCGCCGC TGGCGCGTAT TGATAGCGTT GAGCGTGAAC CGTTTATCTG GTCACAACTG
CCCACTGAGT TCACCATCCG CCAGAGCGCG GGCGGCGCCA TGAATACGCA AATTGTTCCC
GATGCCGCCA CTTGCCCTGC TTGCCTTGCC GAAATGAATA CCCCAGGCGA ACGGCGTTAT
CGTTATCCAT TTATCAACTG TACCCACTGC GGCCCGCGCT TCACCATTAT TCGCGCCATG
CCTTACGATC GCCCGTTTAC CGTGATGGCG GCGTTTCCGC TGTGTCCAGC CTGTGATAAA
GAGTACCGCG ACCCGCTCGA TCGTCGCTTC CACGCCCAGC CGGTGGCCTG CCCGGAGTGT
GGCCCGTATC TTGAATGGGT AAGTCATGGT GAACATGCAG AACAAGAGGC GGCATTACAG
GCGGCTATCG CACAGTTAAA AATGGGCAAC ATTGTCGCCA TCAAAGGGAT TGGCGGATTT
CATCTTGCCT GCGATGCACG TAACAGTAAC GCGGTGGCGA CACTTCGGGC GCGCAAACAT
CGCCCGGCGA AACCGCTGGC AGTCATGTTG CCAGTGGCTG ACGGTTTACC AGACGCTGCG
CGCCAGTTGC TTACCACGCC CGCCGCGCCG ATTGTGCTGG TGGATAAAAA ATACGTTCCT
GAGCTTTGTG ATGATATCGC CCCTGGCCTT AACGAAGTCG GGGTAATGTT GCCTGCGAAT
CCGCTTCAGC ATTTGCTGTT ACAGGAACTA CAATGCCCGC TGGTGATGAC CTCTGGCAAC
CTGAGCGGTA AACCACCGGC TATCAGCAAC GAACAGGCGC TGGAGGATTT GCAGGGCATT
GCCGACGGAT TCTTAATACA CAACCGCGAC ATTGTGCAGC GGATGGATGA TTCGGTGGTG
CGCGAAAGCG GCGAAATGCT GCGCCGTTCG CGGGGGTATG TGCCGGATGC GCTGGCTTTG
CCTCCGGGCT TTAAAAATGT TCCGCCTGTA CTGTGTCTCG GCGCGGATCT GAAAAATACC
TTCTGCCTGG TGCGCGGTGA ACAAGTGGTG TTGAGCCAGC ATCTGGGCGA TTTAAGTGAC
GATGGCATCC AGACGCAGTG GCGCGAAGCG TTACGCCTGA TGCAAAACAT CTACAATTTC
ACTCCGCAAT ACGTTGTGCA TGACGCACAT CCGGGCTATG TCTCCTGCCA GTGGGCGAGC
GAAATGAATC TGCCGACGCA AACGGTGCTG CATCATCATG CCCACGCAGC GGCGTGTCTG
GCAGAGCATC AGTGGCCGCT GGATGGCGGT GATGTCATTG CTTTGACGCT CGACGGTATC
GGTATGGGGG AGAACGGCGC TTTGTGGGGC GGCGAGTGCC TGCGGGTGAA CTATCGCGAA
TGTGAGCACC TGGGCGGCTT GCCTGCAGTG GCGCTTCCGG GTGGCGATTT GGCGGCGAAG
CAGCCGTGGC GTAACCTGCT GGCGCAGTGC CTGCGCTTTG TGCCGGAGTG GCAGAATTAC
CCTGAAACGG CAAGTGTGCA ACAGCAAAAC TGGAGCGTAC TGGCGCGGGC CATTGAGCGT
GGAATTAACG CGCCGCTGGC GTCATCGTGT GGGCGTTTGT TCGATGCTGT GGCGGCGGCA
CTGGGCTGTG CGCCAGCCAC GTTAAGTTAT GAAGGTGAAG CGGCTTGTGC TCTGGAGGCG
CTAGCAGCCT CATGCGACGG AGTGACGCAT CCGGTGACGA TGCCGCGGGT GGACAATCAA
CTGGATCTCG CCACTTTCTG GCAGCAGTGG CTGAACTGGC AGGCACCGGT TAATCAACGC
GCGTGGGCGT TTCATGATGC GCTGGCGCAG GGTTTTGCCG CGTTGATGCG TGAGCAGGCC
ACGATGCGTG GTATCACTAC GCTGGTATTT AGCGGCGGGG TTATTCATAA CCGTTTGCTG
CGTGCACGTC TGGCGCATTA TCTCGCTGAT TTCACATTGC TGTTTCCACA GAGTTTACCG
GCGGGTGATG GCGGTTTGTC TCTGGGGCAG GGGGTTATTG CTGCGGCGCG TTGGTTAGCG
GGTGAAGTCC AGAACGGATA A
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| Protein sequence | MSGWTGYAIH DGGNNSMAKN TSCGVQLRIR GKVQGVGFRP FVWQLAQQLN LHGDVCNDGD
GVEVRLLEDP ETFLVQLHQH CPPLARIDSV EREPFIWSQL PTEFTIRQSA GGAMNTQIVP
DAATCPACLA EMNTPGERRY RYPFINCTHC GPRFTIIRAM PYDRPFTVMA AFPLCPACDK
EYRDPLDRRF HAQPVACPEC GPYLEWVSHG EHAEQEAALQ AAIAQLKMGN IVAIKGIGGF
HLACDARNSN AVATLRARKH RPAKPLAVML PVADGLPDAA RQLLTTPAAP IVLVDKKYVP
ELCDDIAPGL NEVGVMLPAN PLQHLLLQEL QCPLVMTSGN LSGKPPAISN EQALEDLQGI
ADGFLIHNRD IVQRMDDSVV RESGEMLRRS RGYVPDALAL PPGFKNVPPV LCLGADLKNT
FCLVRGEQVV LSQHLGDLSD DGIQTQWREA LRLMQNIYNF TPQYVVHDAH PGYVSCQWAS
EMNLPTQTVL HHHAHAAACL AEHQWPLDGG DVIALTLDGI GMGENGALWG GECLRVNYRE
CEHLGGLPAV ALPGGDLAAK QPWRNLLAQC LRFVPEWQNY PETASVQQQN WSVLARAIER
GINAPLASSC GRLFDAVAAA LGCAPATLSY EGEAACALEA LAASCDGVTH PVTMPRVDNQ
LDLATFWQQW LNWQAPVNQR AWAFHDALAQ GFAALMREQA TMRGITTLVF SGGVIHNRLL
RARLAHYLAD FTLLFPQSLP AGDGGLSLGQ GVIAAARWLA GEVQNG
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