| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3904 |
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| Symbol | gabT2 |
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| ID | 6970839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3619158 |
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| End bp | 3620438 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643387678 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_002272126 |
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| Protein GI | 209398707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.888156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CAATTCCTCG TGGCGTTGGG
CAAATTCACC CCATTTTCGC TGATCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC
CGTGAGTATC TTGATTTCGC GGGCGGCATT GCGGTGCTCA ATACCGGGCA CCTGCATCCG
AAAGTGGTTG CCGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG
CTGGCTTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT
TTTGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTGAAA
ATCGCCCGCG CTGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG
CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGC
CTGATGCCAG GGCACGTTTA TCGCGCGCTT TATCCTTGCC CACTGCACGG CATCAGTGAA
GATGATGCTA TCGCCAGTAT CCACCGAATT TTTAAAAATG ATGCTGCGCC GGAAGATATC
GCCGCCATCG TGATTGAGCC GGTTCAGGGC GAAGGCGGTT TCTACGCCGC GACGCCTGCG
TTTATGCAGC GTTTACGCGC GCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA
GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAAAT GGGCGTGGCA
CCAGATCTCA CCACCTTTGC GAAATCGATC GCAGGCGGCT TCCCACTGGC GGGCGTCACC
GGGCGCGCCG AAGTGATGGA TGCCGTCGCT CCAGGCGGGC TGGGTGGCAC CTATGCCGGT
AATCCGATTG CCTGCGTGGC GGCGCTGGAA GTGTTGAAGG TGTTCGAGCA GGAAAATCTG
CTGCAGAAAG CCAACGATCT GGGGCAGAAG TTGAAAGATG GATTGTTGGC GATCGCCGAA
AAACACCCTG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT CGAGCTGTTT
GAAGACGGCG ATCACAACAA GCCGGACGCC AAACTCACCG CCGAGATCGT GGCTCGCGCC
CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT
GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT
TTTGCTGAGG CAAAGCAGTA G
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| Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE
DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAATPA FMQRLRALCD EHGIMLIADE
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG
NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF
EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC
FAEAKQ
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