Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3860 |
Symbol | smpB |
ID | 6967470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3579013 |
End bp | 3579495 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643387640 |
Product | SsrA-binding protein |
Protein accession | YP_002272089 |
Protein GI | 209399817 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0583942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGA AAAAAGCACA TAAACCTGGT TCAGCGACCA TCGCGCTTAA CAAGCGCGCC CGTCACGAAT ACTTTATTGA AGAAGAGTTC GAAGCGGGAC TTGCCCTGCA AGGCTGGGAA GTTAAATCCC TGCGCGCAGG AAAAGCCAAT ATTAGCGACA GCTATGTCCT TCTGCGCGAC GGAGAAGCGT TCCTGTTTGG CGCAAACATC ACGCCAATGG CTGTGGCTTC TACGCATGTG GTGTGCGATC CTACCCGTAC CCGCAAGTTA CTTCTCAACC AGCGCGAACT TGATTCGTTG TACGGTCGCG TCAATCGAGA AGGCTATACC GTAGTGGCGC TCTCCCTGTA CTGGAAAAAT GCCTGGTGCA AAGTGAAAAT CGGCGTCGCC AAAGGTAAGA AACAGCACGA TAAACGTTCA GATATCAAAG AACGCGAATG GCAGGTGGAT AAAGCGCGTA TCATGAAAAA CGCCCACCGT TAA
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Protein sequence | MTKKKAHKPG SATIALNKRA RHEYFIEEEF EAGLALQGWE VKSLRAGKAN ISDSYVLLRD GEAFLFGANI TPMAVASTHV VCDPTRTRKL LLNQRELDSL YGRVNREGYT VVALSLYWKN AWCKVKIGVA KGKKQHDKRS DIKEREWQVD KARIMKNAHR
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