| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3847 |
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| Symbol | rimM |
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| ID | 6972093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3569599 |
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| End bp | 3570150 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643387630 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002272079 |
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| Protein GI | 209396490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00015023 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAGCA AACAACTCAC CGCGCAAGCA CCTGTTGATC CCATCGTTTT GGGAAAAATG
GGTTCGTCTT ACGGTATTCG TGGGTGGCTC AGAGTGTTTT CTTCCACCGA AGACGCCGAA
AGCATTTTTG ACTATCAGCC CTGGTTTATC CAGAAGGCGG GTCAGTGGCA GCAAGTCCAG
CTGGAAAGCT GGAAGCACCA CAATCAGGAC ATGATCATCA AGCTGAAAGG CGTTGACGAT
CGTGATGCGG CGAACCTGCT GACGAATTGT GAAATTGTCG TGGATTCATC GCAGCTGCCT
CAGCTTGAAG AGGGTGACTA CTACTGGAAA GACCTGATGG GCTGCCAGGT AGTAACCACT
GAAGGCTACG ATCTCGGTAA AGTCGTCGAT ATGATGGAAA CCGGATCCAA TGACGTTCTC
GTCATTAAGG CAAACCTGAA AGATGCGTTT GGTATCAAGG AACGTCTCGT ACCGTTCCTC
GATGGGCAGG TTATCAAGAA AGTCGATCTC ACTACTCGTT CAATCGAAGT AGATTGGGAT
CCTGGTTTTT AA
|
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| Protein sequence | MMSKQLTAQA PVDPIVLGKM GSSYGIRGWL RVFSSTEDAE SIFDYQPWFI QKAGQWQQVQ
LESWKHHNQD MIIKLKGVDD RDAANLLTNC EIVVDSSQLP QLEEGDYYWK DLMGCQVVTT
EGYDLGKVVD MMETGSNDVL VIKANLKDAF GIKERLVPFL DGQVIKKVDL TTRSIEVDWD
PGF
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