| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3844 |
|---|
| Symbol | |
|---|
| ID | 6968378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3567853 |
|---|
| End bp | 3568335 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643387627 |
|---|
| Product | putative outer membrane lipoprotein |
|---|
| Protein accession | YP_002272076 |
|---|
| Protein GI | 209399323 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00547019 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGC ACCTGGTAGC ACCCCTGATT TTCACCTCAC TAATACTGAC TGGCTGCCAG
TCCCCTCAGG GAAAGTTTAC TCCTGAGCAA GTCGCCGCTA TGCAATCTTA TGGATTTACT
GAATCCGCCG GCGACTGGTC GCTGGGCTTA TCAGATGCCA TTCTGTTCGC AAAAAATGAC
TACAAATTGC TCCCGGAAAG CCAGCAACAG ATCCAAACCA TGGCAGCCAA ATTGGCCTCG
ACAGGGCTAA CACATGCCCG TATGGATGGA CACACCGATA ACTATGGTGA AGACAGTTAC
AACGAAGGCT TATCATTGAA ACGGGCGAAT GTCGTGGCCG ATGCATGGGC TATGGGTGGA
CAAATTCCAC GCAGCAATCT CACCACACAG GGTTTAGGAA AAAAATATCC CATAGCCAGT
AACAAGACCG CCCAGGGCCG CGCCGAGAAC CGCCGCGTCG CAGTGGTGAT TACTCCCCCT
TAA
|
|---|
| Protein sequence | MIKHLVAPLI FTSLILTGCQ SPQGKFTPEQ VAAMQSYGFT ESAGDWSLGL SDAILFAKND
YKLLPESQQQ IQTMAAKLAS TGLTHARMDG HTDNYGEDSY NEGLSLKRAN VVADAWAMGG
QIPRSNLTTQ GLGKKYPIAS NKTAQGRAEN RRVAVVITPP
|
|---|
| |