Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3834 |
Symbol | |
ID | 6968784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3558531 |
End bp | 3559262 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643387617 |
Product | hypothetical protein |
Protein accession | YP_002272066 |
Protein GI | 209396881 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000211618 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGC TGATTGTCCC GCAGTGGCCG CTGCCAAAAG GTGTTGCGGC CTGTAGCTCT ACTCGTATCG GCGGCGTGAG CTTGCCCCCG TATGACTCGC TCAACCTCGG TGCCCATTGT GGCGATAACC CGGATCACGT TGAGGAGAAT CGCAAGCGAC TTTTTGCTGC GGGCAATTTG CCTTCTAAAC CGGTCTGGCT TGAGCAGGTA CACGGCAAAG ATGTGCTTAA TCTTACTGGC GAACCTTATG CCTCAAAACG AGCAGATGCC TCTTATAGCA ATACGCCCGG CAGGGTTTGC GCAGTGATGA CTGCCGACTG CCTCCCTGTG CTGTTTTGCA ATCGAGCGGG AACGGAAGTC GCCGCCGCTC ATGCTGGCTG GCGTGGACTG TGCGCAGGCG TGCTGGAAGA GACAGTTTCC TGTTTTGCTG ATAATCCAGA AAATATTCTC GCCTGGTTAG GGCCGGCAAT TGGCCCACGC GCGTTTGAAG TGGGGGCGGA GGTTCGCGAG GCGTTTATGG CAGTAGACGC CGAAGCGAGT ACAGCTTTCA TTCAGCATGG TGATAAGTAT CTGGCGGACA TTTATCAGCT TGCCCGGCAG CGTCTGGCGA ACGTGGGTGT TGAGCAAATT TTCGGCGGCG ACCGTTGTAC ATATACGGAA AATGAGACTT TCTTCTCTTA TCGTCGCGAC AAGACCACCG GTCGTATGGC AAGTTTCATT TGGCTGATAT AA
|
Protein sequence | MSKLIVPQWP LPKGVAACSS TRIGGVSLPP YDSLNLGAHC GDNPDHVEEN RKRLFAAGNL PSKPVWLEQV HGKDVLNLTG EPYASKRADA SYSNTPGRVC AVMTADCLPV LFCNRAGTEV AAAHAGWRGL CAGVLEETVS CFADNPENIL AWLGPAIGPR AFEVGAEVRE AFMAVDAEAS TAFIQHGDKY LADIYQLARQ RLANVGVEQI FGGDRCTYTE NETFFSYRRD KTTGRMASFI WLI
|
| |