| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3822 |
|---|
| Symbol | pssA |
|---|
| ID | 6971777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3547041 |
|---|
| End bp | 3548396 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643387607 |
|---|
| Product | phosphatidylserine synthase |
|---|
| Protein accession | YP_002272060 |
|---|
| Protein GI | 209399593 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.130415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCAA AATTTAAGCG TAATAAACAT CAACAACACC TTGCCCAACT ACCCAAGATT
TCTCAATCAG TTGATGATGT CGATTTCTTT TACGCTCCCG CCGACTTCCG GGAGACGCTG
CTGGAAAAAA TAGCCAGCGC GAAGCAGCGC ATTTGCATTG TCGCCCTGTA TCTCGAACAG
GATGACGGTG GCAAAGGCAT TCTGAACGCG TTGTATGAAG CTAAAAGGCA GCGTCCGGAA
CTGGATGTGC GGGTGCTGCT CGACTGGCAT CGTGCACAAC GTGGACGCAT TGGCGCTGCG
GCATCTAACA CTAACGCTGA CTGGTACTGT CGCATGGCGC AGGAAAATCC GGGCGTAGAT
GTTCCGGTTT ATGGCGTTCC AATCAATACC CGTGAAGCCC TTGGTGTTCT GCACTTTAAA
GGCTTTATCA TCGACGATAG CGTACTTTAT AGCGGTGCCA GCCTGAACGA TGTTTACCTG
CATCAGCACG ATAAATATCG CTACGACCGT TATCATCTTA TCCGTAACCG TAAGATGTCA
GACATTATGT TTGAATGGGT TACACAGAAT ATTATGAATG GCCGCGGCGT TAATCGTCTG
GATGATGTTA ATCGGCCAAA AAGCCCGGAA ATCAAGAACG ATATTCGTCT GTTCCGCCAG
GAGCTGCGTG ATGCCGCTTA TCATTTCCAG GGCGATGCCG ACAACGATCA GCTTTCCGTA
ACGCCGCTAG TGGGGCTGGG GAAATCGAGT CTGTTGAACA AGACCATTTT CCATCTTATG
CCTTGTGCCG AGCAGAAACT AACCATCTGT ACGCCATACT TCAACCTGCC AGCAATCCTT
GTGCGCAATA TTATCCAGTT GCTGCGCGAA GGGAAAAAGG TCGAAATTAT TGTTGGTGAT
AAAACCGCGA ACGACTTCTA CATTCCGGAA GATGAACCTT TCAAGATAAT TGGCGCATTG
CCTTATCTCT ATGAGATCAA TCTGCGTCGT TTCCTGAGCC GTTTGCAGTA TTACGTCAAT
ACTGACCAGC TAGTGGTTCG GTTATGGAAA GATGACGACA ACACCTATCA CCTAAAAGGG
ATGTGGGTTG ATGATAAGTG GATGTTGATC ACCGGTAATA ACCTGAACCC GCGCGCCTGG
CGTCTGGATC TGGAAAACGC CATTTTGATC CACGATCCAC AACTGGAGCT TGCGCCGCAG
CGAGAGAAAG AACTGGAGCT GATCCGCGAG CATACCACCA TCGTTAAGCA CTATCGCGAT
CTGCAAAGTA TTGCCGATTA TCCGGTGAAG GTTCGTAAAC TCATCCGCCG TTTGCGCCGT
ATCCGCATCG ACCGATTAAT TAGCCGCATC CTGTAA
|
|---|
| Protein sequence | MLSKFKRNKH QQHLAQLPKI SQSVDDVDFF YAPADFRETL LEKIASAKQR ICIVALYLEQ
DDGGKGILNA LYEAKRQRPE LDVRVLLDWH RAQRGRIGAA ASNTNADWYC RMAQENPGVD
VPVYGVPINT REALGVLHFK GFIIDDSVLY SGASLNDVYL HQHDKYRYDR YHLIRNRKMS
DIMFEWVTQN IMNGRGVNRL DDVNRPKSPE IKNDIRLFRQ ELRDAAYHFQ GDADNDQLSV
TPLVGLGKSS LLNKTIFHLM PCAEQKLTIC TPYFNLPAIL VRNIIQLLRE GKKVEIIVGD
KTANDFYIPE DEPFKIIGAL PYLYEINLRR FLSRLQYYVN TDQLVVRLWK DDDNTYHLKG
MWVDDKWMLI TGNNLNPRAW RLDLENAILI HDPQLELAPQ REKELELIRE HTTIVKHYRD
LQSIADYPVK VRKLIRRLRR IRIDRLISRI L
|
|---|
| |