Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3815 |
Symbol | |
ID | 6968004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3539737 |
End bp | 3540324 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643387600 |
Product | neutral amino-acid efflux protein |
Protein accession | YP_002272053 |
Protein GI | 209396559 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.799014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACCGA CCCTTTTAAG TGCTTTTTGG ACTTACACCC TGATTACCGC CATGACGCCA GGACCGAACA ATATTCTCGC CCTTAGCTCA GCCACAACGC ACGGATTTCA TCAGAGTACC CGCGTGCTGG CAGGGATGAG TCTGGGATTT TTAATCGTCA TGTTGCTGTG TGCGGGCATT TCGTTTTCAC TGGCTGTTAT CGACCCGGCA GCTGTGCATC TGTTGAGTTG GGCGGGGGCG GCATATATTG TCTGGCTGGC GTGGAAAATC GCTACCAGTC CAACAAAGGA AGACGGGCTT CAGACAAAAC CAATCAGTTT TTGGGCCAGC TTTGCTTTGC AGTTTGTGAA CGTCAAAATC ATTTTGTACG GTGTTACGGC ACTGTCGACA TTTGTTCTGC CGCAAACACA GGCGTTAAGC TGGATAGTTG GCGTCAGCGT TTTGCTGGCA ATGATTGGGA CGTTTGGTAA TGTGTGCTGG GCGCTGGCGG GGCATCTGTT TCAGCGATTG TTTCGCCAGT ATGGTCGCCA GTTAAATATC GTGCTGGCGC TGCTGCTGAT CTATTGCGCG GTACGCATTT TCTATTAA
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Protein sequence | MTPTLLSAFW TYTLITAMTP GPNNILALSS ATTHGFHQST RVLAGMSLGF LIVMLLCAGI SFSLAVIDPA AVHLLSWAGA AYIVWLAWKI ATSPTKEDGL QTKPISFWAS FALQFVNVKI ILYGVTALST FVLPQTQALS WIVGVSVLLA MIGTFGNVCW ALAGHLFQRL FRQYGRQLNI VLALLLIYCA VRIFY
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