| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3814 |
|---|
| Symbol | |
|---|
| ID | 6968778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3538753 |
|---|
| End bp | 3539679 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643387599 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002272052 |
|---|
| Protein GI | 209397058 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.869159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAC ATTCTAAATT CGATATTTTC GATAGGTTTG GGGTTATGGA TCTGCGCCGT
TTTATTACGC TTAAAACCGT GGTGGAAGAG GGTTCCTTTT TGCGAGCTTC GCAAAAATTG
TGCTGTACAC AATCGACGGT GACTTTTCAT ATTCAGCAGC TTGAGCAGGA GTTCTCGGTA
CAGTTATTTG AGAAAATTGG CCGACGGATG TGCCTCACTC GCGAAGGTAA AAAGCTGCTG
CCGCACATTT ATGAACTCAC CAGAGTGATG GATACCCTTC GTGAGGCTGC CAAAAAGGAG
TCGGATCCGG ACGGGGAACT ACGCGTTGTT TCGGGCGAAA CGTTGCTCTC TTACCGAATG
CCGCAGGTGT TGCAGCGTTT TCGGCAACGC GCCCCAAAAG TGCGTTTATC GTTGCAGTCT
CTGAACTGTT ACGTGATCCG TGATGCGCTA TTGAATGATG AGGCCGATGT CGGGGTTTTT
TATCGCGTAG GGAATGATGA TGCCCTGAAC CGACGAGAAT TGGGTGAGCA ATCGCTGGTG
CTGGTAGCTT CACCGCAAAT TGCAGATGTC GATTTTACTG AGCCGGGAAG ACATAACGCC
TGTAGCTTTA TTATCAACGA ACCGCAATGT GTATTCCGGC AGATATTTGA GAGCACGCTG
CGCCAGCGGC GGATCACGGT GGAAAACACC ATTGAGCTGT TAAGCATTGA AAGTATCAAA
CGTTGTGTCG CGGCGAATAT CGGTGTCAGT TACTTGCCCC GCTTTGCGGT GGAAAAAGAG
CTTGAGAGCG GAGAATTAAT TGAATTGCCT TTTGGCGAAC ACTCGCAGAC CATTACGGCA
ATGTGCGCTC ACCATGCCGG AAAAGCGGTT AGCCCGGCGA TGCACACTTT TATTCAGTGT
GTTGAAGATT GTTTTTTGCC GGGATAA
|
|---|
| Protein sequence | MFLHSKFDIF DRFGVMDLRR FITLKTVVEE GSFLRASQKL CCTQSTVTFH IQQLEQEFSV
QLFEKIGRRM CLTREGKKLL PHIYELTRVM DTLREAAKKE SDPDGELRVV SGETLLSYRM
PQVLQRFRQR APKVRLSLQS LNCYVIRDAL LNDEADVGVF YRVGNDDALN RRELGEQSLV
LVASPQIADV DFTEPGRHNA CSFIINEPQC VFRQIFESTL RQRRITVENT IELLSIESIK
RCVAANIGVS YLPRFAVEKE LESGELIELP FGEHSQTITA MCAHHAGKAV SPAMHTFIQC
VEDCFLPG
|
|---|
| |