Gene ECH74115_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3783 
Symbol 
ID6968087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3507481 
End bp3508674 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID643387570 
ProductROK family protein 
Protein accessionYP_002272023 
Protein GI209397633 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCT GCATTAACAA TCAACAGATT CGCCACCATA ACAAATGCGT GATTCTGGAA 
CTGCTGTACC GGCAAAAGCG CGCCAATAAA TCAACGCTGG CCCGGCTGGC GCAAATTTCG
ATTCCGGCAG TCAGTAATAT TTTGCAGGAA CTGGAAAGCG AAAAACGGGT GGTGAATATC
GACGATGAAA GCCAGACGCG CGGGCATAGT AGCGGTACAT GGCTGATTGC GCCGGAAGGT
GACTGGACGC TGTGTCTGAA CGTGACGCCC ACCAGTATTG AGTGTCAGGT TGCTAATGCT
TGTTTAAGTC CGAAAGGTGA ATTTGAGTAT TTACAGATTG ATGCACCGAC GCCGCAGGCG
CTGCTGTCCG AAATCGAAAA ATGCTGGCAT CGCCACCGTA AATTGTGGCC GGACCGCACC
ATCAATCTGG CGCTGGCAAT CCACGGTCAG GTTGATCCAG TGACTGGAGT GTCGCAAACC
ATGCCGCAAG CGCCGTGGAC AACGCCGGTT GAGGTGAAGT ATCTGCTGGA AGAGAAGCTG
GGCATTCGGG TGATGGTCGA TAATGACTGC GTGATGCTGG CGCTGGCGGA AAAATGGCAA
AATAATTCGC AGGAACGGGA TTTCTGCGTG ATCAACGTTG ATTACGGCAT TGGCTCGTCG
TTCGTGATTA ACGAGCAAAT TTATCGCGGC AGTTTGTATG GTAGCGGACA GATTGGTCAC
ACCATCGTTA ATCCGGATGG CGTCGTCTGC GACTGTGGAC GTTACGGCTG CCTGGAAACC
GTCGCCTCGT TAAGTGCATT AAAAAAACAG GCGCGGGTAT GGCTAAAATC ACAACCGGTT
AATACTCAGC TTGATCCTGA AAAACTGACT ACAGCGCAGT TAATCGCTGC CTGGCAAAGT
GGAGAACCGT GGATCACCAG CTGGGTTGAT CGCTCTGCCA ATGCCATTGG TTTGAGTCTG
TATAACTTCC TCAACATCCT CAATATTAAT CAGATTTGGT TGTACGGTCG CAGTTGTGCC
TTTGGTGAGC ACTGGCTTAA TACTATTATT CGCCAGACAG GATTTAACCC GTTCGACCGC
GACGAAGGAC CGAGCGTGAA AGCGACGCAA ATTGGCTTCG GGCAATTAAG CCGCGCACAA
CAGGTGCTGG GAATTGGCTA TTTGTATGTT GAGACGCAGT TACGACAGAT TTGA
 
Protein sequence
MRACINNQQI RHHNKCVILE LLYRQKRANK STLARLAQIS IPAVSNILQE LESEKRVVNI 
DDESQTRGHS SGTWLIAPEG DWTLCLNVTP TSIECQVANA CLSPKGEFEY LQIDAPTPQA
LLSEIEKCWH RHRKLWPDRT INLALAIHGQ VDPVTGVSQT MPQAPWTTPV EVKYLLEEKL
GIRVMVDNDC VMLALAEKWQ NNSQERDFCV INVDYGIGSS FVINEQIYRG SLYGSGQIGH
TIVNPDGVVC DCGRYGCLET VASLSALKKQ ARVWLKSQPV NTQLDPEKLT TAQLIAAWQS
GEPWITSWVD RSANAIGLSL YNFLNILNIN QIWLYGRSCA FGEHWLNTII RQTGFNPFDR
DEGPSVKATQ IGFGQLSRAQ QVLGIGYLYV ETQLRQI