Gene ECH74115_3782 details

Gene Information

• Locus tag: ECH74115_3782
• ID: 6967023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011353
• Strand: -
• Start bp: 3504082
• End bp: 3507456
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643387569
• Product: tetratricopeptide repeat protein
• Protein accession: YP_002272022
• Protein GI: 209397136

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 58
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCGTGATT ATTCCGCGAA AACATTGCCA GATTGTTCAA TACACTGCCA CAAATCTTTT 
AATTCAGTAT GTCTTGTTAA TATTGAGGGC ACCATGACTC CAGTAAAAGT GTGGCAAGAG 
CGCGTTGAGA TCCCGACCTA TGAAACCGGG CCGCAGGATA TACATCCCAT GTTCCTGGAA 
AATCGCGTTT ATCAGGGATC GTCCGGCGCG GTTTATCCCT ACGGCGTGAC CGATACGCTG 
AGCGAGCAGA AAACCCTGAA ATCCTGGCAG GCGGTGTGGC TGGAAAACGA CTACATCAAA 
GTGATGATCC TGCCGGAATT GGGCGGTCGG GTGCATCGCG CATGGGATAA AGTGAAACAG 
CGCGATTTTG TCTATCACAA TGAAGTCATT AAACCTGCGC TGGTGGGGCT GCTGGGACCG 
TGGATCTCCG GCGGGATTGA GTTTAACTGG CCGCAACACC ATCGCCCGAC CACCTTTATG 
CCCGTTGATT TCACCCTCGA AGCCCATGAA GACGGCGCAC AGACGGTGTG GGTAGGCGAA 
ACGGAGCCGA TGCATGGTTT ACAGGTGATG ACAGGTTTCA CCCTGCGCCC TGACCGGGCG 
GCGCTGGAAA TCGCCAGCCG CGTCTATAAC GGCAACGCCA CGCCGCGTCA TTTCTTGTGG 
TGGGCCAACC CGGCAGTGAA AGGGGGTGAA GGGCATCAGA GCGTCTTTCC GCCGGATGTA 
ACGGCGGTGT TTGATCACGG CAAACGGGCC GTCTCCGCTT TCCCTATCGC CACCGGCACT 
TACTACAAAG TGGACTACTC CGCTGGAGTG GACATTTCTC GCTATAAAAA TGTGCCCGTT 
CCAACCTCAT ATATGGCTGA AAAATCACAG TACGATTTTG TTGGCGCGTG GTGTCACGAT 
GAAGATGGCG GTTTGCTACA CGTTGCCAAC CACCATATTG CGCCAGGTAA AAAGCAGTGG 
AGCTGGGGAC ACAGTGAATT TGGCCAGGCG TGGGATAAGA GCCTAACTGA TAATAACGGC 
CCGTATATCG AACTGATGAC CGGTATTTTT GCCGATAACC AGCCTGATTT TACCCGGCTT 
GATGCTTACG AAGAGAAGCG TTTTGAGCAG TTTTTCCTGC CTTACCATTC TCTGGGCATG 
GTGCAAAACG CCTCCCGCGA TGCGGTAATC AAACTCCAGC GTAGTGAGCG GGGGATTGAG 
TGGGGGCTGT ATGCCATCTC TCCGTTGAAC GGATACCGCC TGGCGATCCG CGAAATCGGC 
AAATGCGACG CGTTGCTCGA TGATGCCGTG GCCCTGACAC CAGCGACCGC CATCCAGGGC 
GTGTTACACG GTATCAATCC TGAAAGACTG ACCATTGAGC TCTCTGATGC CGACGGCAAT 
ATTGTACTGA GTTATCAGGA ACATCAGCCG CAAGAGTTGC CGTTGCCGGA CGTCGCCAAA 
GCGCCACTGT CAGCACAAGA CATTACCAGT ACAGATGAAG CCTGGTTTAT CGGTCAGCAT 
CTGGAGCAAT ATCATCACGC CAGCCGTTCA CCGTTCGATT ACTACCTGCG CGGCGTGGCG 
CTGGATCCGC TGGATTACCG CTGTAATCTG GCGCTGGCGA TGCTGGAGTA TAACCGCGCA 
GATTTCCCGC AAGCGGTGGC GTATGCCACT CAGGCTCTGA AACGCGCACA TGCGCTGAAC 
AAAAATCCGC AGTGCGGACA GGCGAGTTTG ATTCGCGCCA GTGCTTACGA ACGTCAGGGA 
CAATATCAAC AAGCCGAAGA GGATTTCTGG CGTGCGGTCT GGAGCGGCAA CAGTAAAGCC 
GGAGGCTATT ATGGTCTGGC ACGACTGGCG GCGCGTAATG GTAACTTCGA CGCGGGTCTG 
GATTTTTGCC AACAAAGTCT TCGCGCCTGC CCAATCAATC AGGAAGTGCT TTGCCTGCAT 
AATCTGCTGC TGGTGTTAAG TGGTCGTCAG GACAACGCGC GTTTGCAGCG CGAGAAACTG 
CTGCGCGATT ATCCGCTGAA CGCCACTCTG TGGTGCCTGA ACTGGTTCGA TGGTCGTAGC 
GAATCAGCTC TCGCGCAGTG GCGCGGTCTG TGTCAGGGAC GCGACGTTAA CGCCCTGATG 
ACCGCCGGGC AACTGATTAA CTGGGGAATG CCCACCCTCG CGGCAGAGAT GCTGAATGCA 
CTGGACTGCC AGCGCACGCT GCCGCTTTAC CTGCAAGCCA GCTTGCTGCC GAAAGCCGAA 
CGTGGCGAAC TGGTCGCAAA AGCCATTGAT GTCTTCCCGC AGTTTGTCCG TTTCCCGAAT 
ACGCTGGAAG AAGTGGCGGC GCTGGAGAGT ATTGAAGAGT GCTGGTTTGC TCGCCATTTA 
CTGGCCTGCT TCTACTACAA CAAACGTAGC TACAACGAAG CCATTGCCTT ATGGCAACGT 
TGCGTAGAGA TGTCGCCGGA GTTTGCCGAC GGCTGGCGCG GGTTAGCGAT CCATGCGTGG 
AATAAGCAAC ACGATTATGA GCTGGCCGCG CGTTATCTTG ATAATGCTTA TCAGCTTGCG 
CCGCAGGATG CACGTCTGCT TTTCGAACGG GATTTGCTTG ATAAGCTAAG TGGAACCACA 
CCGGAGAAAC GACTGGCGCG TCTGGAAAAT AATCTGGAAA TTGCGCTGAA ACGCGACGAC 
ATGACCGCAG AACTGCTCAA TTTGTGGCAT CTCACGGGGC AGGCAGACAA AGCGGCGGAC 
ATTCTCGCCA CGCGCAAATT CCACCCGTGG GAAGGCGGGG AAGGGAAGGT CACCAGTCAG 
TTTATCCTCA ACCAGTTATT ACGCGCCTGG CAGCATCTTG ATGCCAGAGA GCCGCAGCAG 
GCCAGCGAAC TGCTTCATGC CGCGCTGCAT TATCCGGAGA ATTTAAGCGA AGGCCGTTTA 
CCGGGGCAAA CTGATAACGA CATCTGGTTC TGGCAGGCGA TATGCGCCAA AGCCCAGGGC 
GATGAAACTG AAGCGACGCG CTGTTTACAT CTGGCGGCGA CCGGCGATCG CACCATTAAC 
ATCCACAGCT ATTACAACGA TCAGCCGGTT GATTACCTCT TCTGGCAAGG AATGGCGCTG 
CGATTACTGG GCGAACAACA CACCGCACAG CAACTGTTTA GTGAAATGAA ACAGTGGGCG 
CAAGAGATGG CGAAAACCAG TATCGAAGCG GATTTCTTTG CCGTCTCGCA GCCTGACTTG 
TTGTCGCTGT ATGGCGATTT ACAACAGCAG CATAAAGAAA AATGCCTGAT GGTGGCGATG 
CTGGCGGCCG CGGGATTAGG CGAGATTGCG CAATACGAAT CTGCTCGCGC TGAATTGACG 
GCGATTAATC CGGCCTGGCC GAAAGCGGCA TTATTCACCA CCGTGATGCC TTTTATTTTT 
AACTACGTTC ACTAA 

 

Protein sequence

MRDYSAKTLP DCSIHCHKSF NSVCLVNIEG TMTPVKVWQE RVEIPTYETG PQDIHPMFLE 
NRVYQGSSGA VYPYGVTDTL SEQKTLKSWQ AVWLENDYIK VMILPELGGR VHRAWDKVKQ 
RDFVYHNEVI KPALVGLLGP WISGGIEFNW PQHHRPTTFM PVDFTLEAHE DGAQTVWVGE 
TEPMHGLQVM TGFTLRPDRA ALEIASRVYN GNATPRHFLW WANPAVKGGE GHQSVFPPDV 
TAVFDHGKRA VSAFPIATGT YYKVDYSAGV DISRYKNVPV PTSYMAEKSQ YDFVGAWCHD 
EDGGLLHVAN HHIAPGKKQW SWGHSEFGQA WDKSLTDNNG PYIELMTGIF ADNQPDFTRL 
DAYEEKRFEQ FFLPYHSLGM VQNASRDAVI KLQRSERGIE WGLYAISPLN GYRLAIREIG 
KCDALLDDAV ALTPATAIQG VLHGINPERL TIELSDADGN IVLSYQEHQP QELPLPDVAK 
APLSAQDITS TDEAWFIGQH LEQYHHASRS PFDYYLRGVA LDPLDYRCNL ALAMLEYNRA 
DFPQAVAYAT QALKRAHALN KNPQCGQASL IRASAYERQG QYQQAEEDFW RAVWSGNSKA 
GGYYGLARLA ARNGNFDAGL DFCQQSLRAC PINQEVLCLH NLLLVLSGRQ DNARLQREKL 
LRDYPLNATL WCLNWFDGRS ESALAQWRGL CQGRDVNALM TAGQLINWGM PTLAAEMLNA 
LDCQRTLPLY LQASLLPKAE RGELVAKAID VFPQFVRFPN TLEEVAALES IEECWFARHL 
LACFYYNKRS YNEAIALWQR CVEMSPEFAD GWRGLAIHAW NKQHDYELAA RYLDNAYQLA 
PQDARLLFER DLLDKLSGTT PEKRLARLEN NLEIALKRDD MTAELLNLWH LTGQADKAAD 
ILATRKFHPW EGGEGKVTSQ FILNQLLRAW QHLDAREPQQ ASELLHAALH YPENLSEGRL 
PGQTDNDIWF WQAICAKAQG DETEATRCLH LAATGDRTIN IHSYYNDQPV DYLFWQGMAL 
RLLGEQHTAQ QLFSEMKQWA QEMAKTSIEA DFFAVSQPDL LSLYGDLQQQ HKEKCLMVAM 
LAAAGLGEIA QYESARAELT AINPAWPKAA LFTTVMPFIF NYVH