Gene ECH74115_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3781 
Symbol 
ID6967636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3503002 
End bp3503985 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID643387568 
Productsugar ABC transporter, periplasmic sugar-binding protein 
Protein accessionYP_002272021 
Protein GI209396140 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA AAATGAGAAC AACCCGTAAT CTATTATTAA TGGCTACGCT ATTAGGTAGC 
GCACTATTTG CCAGAGCTGC GGATAAAGAA ATGACCATTG GCGCAATATA CCTTGATACT
CAGGGATATT ACGCTGGAGT GCGTCAGGGA GTTCAGGATG CGGCAAAAGA TTCTTCAGTA
CAGGTACAGT TAATTGAAAC TAACGCCCAG GGTGATATTT CGAAAGAAAG TACCTTTGTT
GATACCCTCG TGGCGCGTAA TGTCGATGCT ATTATTTTAT CGGCAGTGTC TGAAAATGGC
AGTAGCCGTA CCGTTCGTCG CGCCAGTGAA GCGGGTATTC CGGTGATTTG CTACAACACC
TGTATTAATC AAAAGGGGGT CGATAAATAT GTCTCGGCGT ATCTGGTGGG TGACCCGCTG
GAATTTGGTA AAAAACTGGG TAACGCTGCC GCCGATTATT TTATTGCCAA TAAAATTGAC
CAGCCGAAAA TTGCCGTCAT CAATTGCGAA GCCTTTGAAG TTTGTGTGCA GCGACGTAAA
GGATTTGAAG AAGTATTAAA ATCCCGCGTT CCCGGCGCGC AAATTGTCGC TAATCAGGAA
GGGACTGTTT TAGATAAAGC GATTTCCGTT GGTGAAAAAC TGATTATCTC CACGCCGGAT
CTCAACGCCA TTATGGGGGA ATCGGGCGGT GCGACACTCG GTGCGGTAAA AGCGGTACGT
AATCAAAATC AGGCCGGAAA AATTGCTGTT TTCGGTTCGG ATATGACAAC CGAAATTGCT
CAGGAGCTGG AAAACAATCA GGTGCTGAAA GCGGTAGTGG ATATTTCCGG TAAGAAAATG
GGCAATGCTG TTTTCGCGCA AACATTGAAG GTTATCAATA AACAAGCCGA CGGTGAAAAA
GTGATTCAGG TGCCTATCGA TCTCTATACC AAAACGGAAG ACGGTAAACA GTGGCTGGCA
ACGCACGTTG ATGGTCTGCC CTAA
 
Protein sequence
MPKKMRTTRN LLLMATLLGS ALFARAADKE MTIGAIYLDT QGYYAGVRQG VQDAAKDSSV 
QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG SSRTVRRASE AGIPVICYNT
CINQKGVDKY VSAYLVGDPL EFGKKLGNAA ADYFIANKID QPKIAVINCE AFEVCVQRRK
GFEEVLKSRV PGAQIVANQE GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR
NQNQAGKIAV FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK
VIQVPIDLYT KTEDGKQWLA THVDGLP