Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3752 |
Symbol | sseB |
ID | 6972311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3478928 |
End bp | 3479704 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643387543 |
Product | enhanced serine sensitivity protein SseB |
Protein accession | YP_002271996 |
Protein GI | 209397515 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0623202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAA CAAAAAATGA ACTTGAAGAC CTGCTGGAAA AAGCAGCAAC CGAACCGGCG CACCGCCCGG CCTTTTTCCG TACTCTACTG GAATCCACCG TCTGGGTGCC TGGTACGGCG GCGCAGGGCG AGGCTGTGGT TGAAGATAGC GCGCTTGATT TACAGCACTG GGAAAAAGAA GACGGCACCA GCGTCATTCC TTTTTTTACC TCGTTAGAAG CACTTCAACA GGCGGTTGAA GACGAACAGG CATTTGTCGT AATGCCCGTT CGCACATTGT TTGAGATGAC CCTTGGCGAA ACGCTCTTCC TTAATGCCAA ACTGCCGACC GGTAAAGAAT TTATGCCGCG TGAAATCAGT TTGTTGATTG GTGAAGAGGG AAATCCGCTG AGCAGCCAGG AAATCCTGGA AGGCGGTGAA TCGCTGATAT TATCGGAAGT CGCAGAGCCG CCAGCACAAA TGATTGATTC ACTCACCACC TTATTTAAAA CCATTAAGCC TGTGAAGCGT GCTTTTATTT GTTCAATTAA AGAGAACGAA GAGGCACAGC CTAATTTACT TATTGGCATT GAAGCCGATG GTGATATCGA AGAAATTATT CAGGTGGCGG GAAGTGTAGC GACCGATACA TTACCTGGCG ATGAACCAAT CGATATTTGT CAGGTGAAAA AAGGGGAAAA AGGAATTAGC CACTTTATTA CCGAACATAT TGCGCCATTC TATGAACGTC GCTGGGGTGG TTTTTTGCGT GACTTTAAAC AGAATCGGAT AATCTAA
|
Protein sequence | MSETKNELED LLEKAATEPA HRPAFFRTLL ESTVWVPGTA AQGEAVVEDS ALDLQHWEKE DGTSVIPFFT SLEALQQAVE DEQAFVVMPV RTLFEMTLGE TLFLNAKLPT GKEFMPREIS LLIGEEGNPL SSQEILEGGE SLILSEVAEP PAQMIDSLTT LFKTIKPVKR AFICSIKENE EAQPNLLIGI EADGDIEEII QVAGSVATDT LPGDEPIDIC QVKKGEKGIS HFITEHIAPF YERRWGGFLR DFKQNRII
|
| |