Gene ECH74115_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3729 
Symbol 
ID6967829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3450054 
End bp3450569 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID643387522 
Productsurface antigen family protein 
Protein accessionYP_002271975 
Protein GI209396163 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.272447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AAAAATGTCT TCTGCCTGTG GCAATGTTAG CGTCATTCAC TCTGGCAGGA 
TGCCAGTCAA ATGCTGACGA TCATGCCGCC GATGTTTATC AAACCGATCA ACTGAATACC
AAACAAGAAA CTAAAACCGT TAATATTATT TCCATTCTTC CCGCAAAAGT TGCCGTAGAC
AACTCCCAAA ATAAACGGAA CGCACAAGCC TTCGGCGCGC TTATTGGCGC AGTCGCTGGC
GGTGTTATCG GCCACAACGT CGGGTCTGGC AGCAATTCCG GAACGACGGC AGGTGCAGTT
GGCGGCGGAG CTGTAGGCGC GGCAGCGGGT TCTATGGTGA ATGATAAAAC CTTAGTGGAA
GGTGTTTCTT TAACGTATAA GGAAGGCACC AAAGTGTATA CCTCTACTCA GGTGGGTAAA
GAGTGCCAGT TTACGACAGG TTTAGCCGTT GTTATTACCA CGACGTATAA CGAAACGCGT
ATTCAGCCAA ATACCAAATG TCCTGAAAAG AGCTAA
 
Protein sequence
MKFKKCLLPV AMLASFTLAG CQSNADDHAA DVYQTDQLNT KQETKTVNII SILPAKVAVD 
NSQNKRNAQA FGALIGAVAG GVIGHNVGSG SNSGTTAGAV GGGAVGAAAG SMVNDKTLVE
GVSLTYKEGT KVYTSTQVGK ECQFTTGLAV VITTTYNETR IQPNTKCPEK S