| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3685 |
|---|
| Symbol | tal1 |
|---|
| ID | 6969083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3398907 |
|---|
| End bp | 3399857 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643387479 |
|---|
| Product | transaldolase A |
|---|
| Protein accession | YP_002271932 |
|---|
| Protein GI | 209399196 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.206304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGT TAGACGGCAT CAAACAGTTC ACCACTGTCG TGGCAGACAG CGGCGATATT
GAGTCCATTC GCCATTATCA TCCCCAGGAT GCCACCACCA ATCCTTCGCT GTTACTCAAG
GCTGCCGGAT TATCACAATA TGAGCATTTA ATAGACGATG CTATCGCCTG GGGTAAAAAA
AATGGCAAGA CCCAGGAACA ACAGGTGGTC GCAGCGTGTG ACAAACTGGC GGTCAATTTC
GGTGCTGAAA TCCTCAAAAT CGTACCCGGT CGCGTGTCAA CAGAAGTTGA TGCACGCCTC
TCTTTTGATA AAGAAAAGAG TATTGAGAAG GCGCGCCATC TGGTGGACTT GTATCAGCAA
CAAGGCGTTG AGAAATCACG CATTCTGATC AAACTGGCTT CGACCTGGGA AGGAATTCGC
GCGGCAGAAG AGCTGGAAAA AGAAGGTATT AACTGCAACC TGACGCTGCT GTTTTCTTTT
GCACAGGCGC GGGCCTGTGC AGAAGCGGGC GTTTTTCTGA TTTCGCCGTT TGTCGGGCGT
ATTTATGACT GGTATCAGGC ACGCAAGCCG ATGGACCCAT ATGTGGTGGA AGAAGATCCG
GGCGTTAAAT CGGTGCGCAA TATCTACGAC TACTATAAGC AACACCACTA TGAAACCATT
GTGATGGGCG CGAGCTTCCG TCGCACCGAA CAAATCCTCG CCTTAACCGG CTGCGATCGA
CTGACTATCG CACCGAATTT GCTGAAGGAG CTGCAGGAAA AAGTTTCGCC AGTGGTACGT
AAATTAATCC CACCTTCTCA GACGTTCCCA CGCCCAGCTC CCATGAGCGA AGCGGAGTTC
CGTTGGGAGC ACAATCAGGA TGCGATGGCG GTAGAAAAAC TGTCTGAAGG CATTCGTCTG
TTCGCCGTTG ATCAACGCAA ACTGGAAGAT CTTCTTGCCG CCAAACTATA A
|
|---|
| Protein sequence | MNELDGIKQF TTVVADSGDI ESIRHYHPQD ATTNPSLLLK AAGLSQYEHL IDDAIAWGKK
NGKTQEQQVV AACDKLAVNF GAEILKIVPG RVSTEVDARL SFDKEKSIEK ARHLVDLYQQ
QGVEKSRILI KLASTWEGIR AAEELEKEGI NCNLTLLFSF AQARACAEAG VFLISPFVGR
IYDWYQARKP MDPYVVEEDP GVKSVRNIYD YYKQHHYETI VMGASFRRTE QILALTGCDR
LTIAPNLLKE LQEKVSPVVR KLIPPSQTFP RPAPMSEAEF RWEHNQDAMA VEKLSEGIRL
FAVDQRKLED LLAAKL
|
|---|
| |