Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3625 |
Symbol | |
ID | 6971926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3346543 |
End bp | 3348732 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643387420 |
Product | diguanylate cyclase |
Protein accession | YP_002271879 |
Protein GI | 209400107 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0101197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTGG AGCATAACCT GATAAAAAAT ATCAAGATAT TCACACTAGC GTTTACGCTC ACCGTGGTAC TTATTCAGCT ATCCCGTTTT ATTTCGCCAC TTGCCATTAT CCATTCCAGT TATATCTTTC TGGCGTGGAT GCCACTGTGC GTAATGCTGT CAATCTTGTT TATCTTTGGC TGGCGCGGTG TCGTTCCCGT TTTATGCGGG ATGTTTTGCA CCAATCTGTG GAACTTTCAT CTCTCTTTTT TACAGACTGC GGTCATGCTC GGTAGCCAGA CGTTTGTCGT GTTGTGTGCC TGCGCAATAT TACGCTGGCA GCTGGGGACG CGTTGGCGTT ATGGATTGAC CAGCCGATAT GTCTGGCAAC GTCTGTTCTG GCTTGGTTTG GTGACGCCGA TCGGCATCAA ATGCAGCATG TATCTTGTGG GGAGCTTCTT TGATTTCCCG CTAAAGATAT CCACCTTTTT CGGCGATGCG GATGCCATTT TCACGGTCGT TGATTTGCTA AGCCTTTTCA CCGCTGTGCT GATTTACAAC ATGCTTTTCT ACTATCTCAC TCGCATGATT GTAAGTCCCC ACTTTGCGCA GATATTGTGG CGCAGGGATA TCGCTCCGTC GTTGGGCAAA GAGAAACGCG CATTTACCTT AAGCTGGCTG GCAGCGTTAA GCGTGCTGCT ACTTCTGTTG TGCACACCTT ATGAAAACGA CTTTATTGCC GGTTACCTGG TACCCGTTTT CTTCATCATC TTTACCCTCG GGGTCGGTAA GCTTCGCTAT CCGTTTTTAA ATCTCACTTG GGCTGTTTCA ACGCTTTGCC TGCTGAATTA CAACCAGAAC TTTTTGCAAG GGGTGGAAAC CGAATATTCG CTGGCATTTA TTCTCGCGGT GCTGATTTCC TTTAGCGTTT GCCTGCTCTA TATGGTGCGC ATTTATCATC GCAGTGAATG GCTTAATCGC CGCTGGCATT TGCAGGCGCT GACCGATCCG TTAACGCTCC TGCCCAACTT TCGTGCGTTG GAACAAGCGC CGGAGCAAGA GGCGGGCAAG AGTTTTTGCT GCCTGCGCAT TGATAATCTT GAGTTTATGA GTCGTCATTA CGGGTTGATG ATGCGTGTTC ACTGTATCCG ATCAATTTAC CGTACGCTGC TGCCATTGAT GCAGGAAAAC GAAAAGTTGT ATCAATTGCC GGGTAGTGAA CTGCTGTTAG TGCTGAGCGG GCCTGAAACG GAAGGGCGAC TCCAGCATAT GGTTAACATC CTGAATAGTC GGCAAATTCA CTGGAACAAT ACCGGGCTGG ATATGGGCTA TGGTGCTGCC TGGGGGCGTT TTGATGGAAA TCAGGAAACC CTGCAACCCT TGTTGGGGCA GTTAAGCTGG CTGGCGGAGC AATCCTGCGC ACATCATCAT GTGCTGGCGC TGGATAGCCG AGAGGAGATG GTTTCCGGGC AGACCACTAA ACAGGTGCTA TTGCTGAATA CCATTCGCAC GGCGTTAGAT CAGGGTGATT TGCTGCTCTA CGCCCAGCCA ATTCGCAACA AAGAGGGTGA AGGTTATGAT GAGGTCCTCG CGCGACTGAA ATATGACGGC GGCATTATGA CCCCGGATAA GTTTCTGCCC CTTATTGCTC AGTTTAACCT TAGCGCGCGT TTTGATTTGC AAGTGCTGGA ATCCTTGTTG AAGTGGCTGG CAACACACCC TTGCGACAAA AAAGGCCCGC GCTTTTCAGT TAATTTAATG CCGCTCACGC TGCTGCAAAA GAATATTGCC GGGCGGATTA TTCGTCTATT TAAGCGTTAT CACATCTCCC CGCAGGCGGT CATTCTTGAG ATCACCGAGG AGCAGGCGTT TTCTAACGCA GAAAGCAGCA TGTACAACAT CGAGCAGCTG CATAAGTTTG GTTTCCGGAT TGCGATTGAT GACTTTGGCA CCGGCTATGC CAACTACGAA CGGTTAAAGC GTTTGCAGGC TGATATCATC AAAATTGATG GCGTCTTTGT GAAAGATATT GTCACGAATA CGCTGGATGC GATGATTGTG AGATCAATTA CCGATCTGGC GAAAGCGAAG TCATTGAGTG TGGTCGCGGA GTTTGTCGAG ACGCAACAGC AACAGGCGCT ATTGCATAAG CTCGGGGTGC AATATCTGCA AGGGTATTTG ATTGGTCGCC CGCAGCCATT AGCTGATTAA
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Protein sequence | MFVEHNLIKN IKIFTLAFTL TVVLIQLSRF ISPLAIIHSS YIFLAWMPLC VMLSILFIFG WRGVVPVLCG MFCTNLWNFH LSFLQTAVML GSQTFVVLCA CAILRWQLGT RWRYGLTSRY VWQRLFWLGL VTPIGIKCSM YLVGSFFDFP LKISTFFGDA DAIFTVVDLL SLFTAVLIYN MLFYYLTRMI VSPHFAQILW RRDIAPSLGK EKRAFTLSWL AALSVLLLLL CTPYENDFIA GYLVPVFFII FTLGVGKLRY PFLNLTWAVS TLCLLNYNQN FLQGVETEYS LAFILAVLIS FSVCLLYMVR IYHRSEWLNR RWHLQALTDP LTLLPNFRAL EQAPEQEAGK SFCCLRIDNL EFMSRHYGLM MRVHCIRSIY RTLLPLMQEN EKLYQLPGSE LLLVLSGPET EGRLQHMVNI LNSRQIHWNN TGLDMGYGAA WGRFDGNQET LQPLLGQLSW LAEQSCAHHH VLALDSREEM VSGQTTKQVL LLNTIRTALD QGDLLLYAQP IRNKEGEGYD EVLARLKYDG GIMTPDKFLP LIAQFNLSAR FDLQVLESLL KWLATHPCDK KGPRFSVNLM PLTLLQKNIA GRIIRLFKRY HISPQAVILE ITEEQAFSNA ESSMYNIEQL HKFGFRIAID DFGTGYANYE RLKRLQADII KIDGVFVKDI VTNTLDAMIV RSITDLAKAK SLSVVAEFVE TQQQQALLHK LGVQYLQGYL IGRPQPLAD
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