| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3624 |
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| Symbol | nupC |
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| ID | 6970185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3345291 |
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| End bp | 3346493 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643387419 |
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| Product | nucleoside transporter NupC |
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| Protein accession | YP_002271878 |
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| Protein GI | 209400703 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00341076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.575462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG TCCTTCATTT TGTACTGGCA CTTGCCGTTG TTGCGATCCT CGCACTGCTG
GTAAGCAGCG ACCGCAAAAA AATTCGTATC CGTTATGTTA TTCAACTGCT TGTTATCGAA
GTGTTACTGG CGTGGTTCTT CCTGAACTCC GACGTTGGTT TAGGCTTCGT GAAAGGCTTC
TCCGAAATGT TCGAAAAACT GCTCGGATTT GCCAACGAAG GGACTAACTT CGTCTTTGGT
AGCATGAATG ATCAAGGCCT GGCATTCTTC TTCCTGAAAG TGCTGTGCCC AATCGTCTTT
ATCTCTGCAC TGATCGGTAT TCTCCAGCAC ATTCGCGTGT TGCCGGTGAT TATCCGCGCA
ATTGGTTTCC TGCTCTCCAA AGTCAACGGC ATGGGCAAAC TGGAATCCTT TAACGCCGTC
AGCTCCCTGA TTCTGGGTCA GTCTGAAAAC TTTATTGCCT ATAAAGATAT CCTTGGCAAA
ATCTCCCGTA ACCGTATGTA CACCATGGCA GCAACGGCGA TGTCCACCGT TTCTATGTCC
ATCGTTGGTG CATACATGAC CATGCTGGAA CCAAAATACG TCGTTGCAGC GCTGGTACTG
AACATGTTCA GCACCTTTAT CGTGCTGTCG CTGATCAACC CTTACCGTGT TGATGCCTGT
GAAGAAAACA TTCAGATGTC CAACCTGCAC GAAGGTCAGA GCTTCTTCGA AATGCTGGGT
GAATACATTC TGGCAGGTTT CAAAGTTGCC ATTATCGTTG CCGCAATGCT GATTGGCTTT
ATCGCCCTGA TCGCCGCGCT GAACGCACTG TTTGCTACCG TGACTGGCTG GATTGGCTAC
AGCATCTCCT TCCAGGGCAT CCTGGGCTAC ATCTTCTATC CGATTGCATG GGTGATGGGT
GTTCCTTCCA GTGAAGCACT GCAAGTGGGC AGTATCATGG CGACCAAACT GGTTTCCAAC
GAGTTCGTTG CGATGATGGA TCTTCAGAAA ATTGCCTCTA CACTCTCTCC GCGTGCTGAA
GGCATCATCT CTGTGTTCCT GGTTTCCTTC GCTAACTTCT CTTCAATCGG GATTATCGCA
GGTGCAGTTA AAGGCCTGAA TGAAGAGCAA GGTAACGTGG TTTCTCGCTT CGGTCTGAAG
CTGGTTTACG GCTCTACCCT GGTGAGTGTG CTGTCTGCGT CAATCGCAGC ACTGGTGCTG
TAA
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| Protein sequence | MDRVLHFVLA LAVVAILALL VSSDRKKIRI RYVIQLLVIE VLLAWFFLNS DVGLGFVKGF
SEMFEKLLGF ANEGTNFVFG SMNDQGLAFF FLKVLCPIVF ISALIGILQH IRVLPVIIRA
IGFLLSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK ISRNRMYTMA ATAMSTVSMS
IVGAYMTMLE PKYVVAALVL NMFSTFIVLS LINPYRVDAC EENIQMSNLH EGQSFFEMLG
EYILAGFKVA IIVAAMLIGF IALIAALNAL FATVTGWIGY SISFQGILGY IFYPIAWVMG
VPSSEALQVG SIMATKLVSN EFVAMMDLQK IASTLSPRAE GIISVFLVSF ANFSSIGIIA
GAVKGLNEEQ GNVVSRFGLK LVYGSTLVSV LSASIAALVL
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