| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3597 |
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| Symbol | dsdA |
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| ID | 6967579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3311455 |
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| End bp | 3312783 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643387394 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_002271853 |
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| Protein GI | 209396399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00277726 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACG CTAAAATGAA CTCGCTCATC GCCCAGTATC CGTTGGTAAA GGATCTGGTT
GCTCTTAAAG AAACCACCTG GTTTAATCCT GGCACGACCT CATTGGCTGA AGGTTTACCT
TATGTTGGCC TGACCGAACA GGATGTTCAG GACGCCCATG CGCGCTTATC CCGTTTTGCA
CCCTATCTGG CAAAAGCATT TCCTGAAACT GCTGCCACTG GGGGGATTAT TGAATCAGAA
CTGGTTGCCA TTCCGGCTAT GCAAAAACGG CTGGAAAAGG AATATCAACA ACCGATCAGC
GGGCAACTGT TACTGAAAAA AGATAGCCAT TTGCCCATTT CCGGCTCCAT AAAAGCACGC
GGCGGGATTT ATGAAGTCCT GGCACATGCA GAAAAACTGG CTCTGGAAGC GGGGTTGCTG
ACGCTTGAAG ATGACTACAG CAAACTGCTT TCTCCGGAGT TTAAACAGTT CTTTAGCCAG
TACAGCATTG CTGTGGGCTC AACCGGAAAT CTGGGGTTAT CAATCGGCAT TATGAGCGCC
CGCATTGGCT TTAAGGTGAC AGTGCATATG TCTGCTGATG CCCGGGCATG GAAAAAAGCG
AAACTGCGCA GCCATGGCGT TACGGTCGTG GAATATGAGC AAGATTATGG TGTTGCCGTC
GAGGAAGGAC GTAAAGCAGC GCAGTCTGAC CCGAACTGTT TCTTTATTGA TGACGAGAAT
TCCCGCACGT TGTTCCTTGG GTATTCCGTC GCAGGCCAGC GTCTTAAAGC GCAATTTGCC
GAGCAAGGTC GTATTGTCGA TGCTGATAAC CCTCTGTTTG TCTATCTGCC GTGTGGTGTT
GGCGGTGGTC CTGGTGGCGT CGCATTCGGA CTTAAGCTGG CGTTTGGCGA TCATGTTCAC
TGCTTTTTTG CCGAACCAAC GCACTCCCCT TGTATGTTGT TAGGCGTCCA TACAGGATTA
CACGATCAGA TTTCTGTTCA GGATATTGGT ATCGACAACC TTACCGCAGC GGATGGCCTT
GCAGTTGGTC GCGCATCAGG CTTTGTCGGG CGGGCAATGG AGCGTCTGCT GGATGGCTTC
TATACCCTTA GCGATCAAAC CATGTATGAC ATGCTTGGCT GGCTGGCGCA GGAAGAAGGT
ATTCGTCTTG AACCTTCGGC ACTGGCGGGT ATGGCCGGAC CTCAGCGCGT GTGTGCATCA
GTAAGTTACC AACAGATGCA CGGTTTCAGC GCAGAACAAC TGCGTAATGC CACTCATCTG
GTGTGGGCGA CGGGAGGTGG AATGGTGCCG GAAGAAGAGA TGGAGCAATA TCTGGCAAAA
GGCCGTTAA
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| Protein sequence | MENAKMNSLI AQYPLVKDLV ALKETTWFNP GTTSLAEGLP YVGLTEQDVQ DAHARLSRFA
PYLAKAFPET AATGGIIESE LVAIPAMQKR LEKEYQQPIS GQLLLKKDSH LPISGSIKAR
GGIYEVLAHA EKLALEAGLL TLEDDYSKLL SPEFKQFFSQ YSIAVGSTGN LGLSIGIMSA
RIGFKVTVHM SADARAWKKA KLRSHGVTVV EYEQDYGVAV EEGRKAAQSD PNCFFIDDEN
SRTLFLGYSV AGQRLKAQFA EQGRIVDADN PLFVYLPCGV GGGPGGVAFG LKLAFGDHVH
CFFAEPTHSP CMLLGVHTGL HDQISVQDIG IDNLTAADGL AVGRASGFVG RAMERLLDGF
YTLSDQTMYD MLGWLAQEEG IRLEPSALAG MAGPQRVCAS VSYQQMHGFS AEQLRNATHL
VWATGGGMVP EEEMEQYLAK GR
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