Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3560 |
Symbol | |
ID | 6969525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3285613 |
End bp | 3286083 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643387359 |
Product | hypothetical protein |
Protein accession | YP_002271819 |
Protein GI | 209395844 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000691184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 5.811840000000001e-23 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAAAAT CATGGAGCGT ACCTTTTCCT GAATCAGAAA CTGAACATGA TGGAATGCCT GTTTTCTGGA GATTCCAGGC GACAGTTGAA GAAGATGGGA TAAAAATATT CGCACTTCAA TATATAGCTT TTCATCAGAC AGAGCATTAT GCATGGTTGG TTCCTGCGCA TTGGATTGTT AATTTTAAAC CAGCACCAAA TCAGTGGTTA CAGGAATGGA AACAAAGGAG AAATAGATAT GCAATTAAGA AAGTAGCAAA AAATGCAGAA AGATCTTTTG CATTCCCAAC GAAGAAACTT GCCATTGAAA GTTTATTGCG CCGGAAGAAA TACCATTTAA TGAGAATCAA ACAAGATTTG GCTGTTGTAT CAACTCTTGT TGATGGTATG AAGAATATTG ATACATCAAC ACCAGATATT GAATATAACT TTGGACACAA CCAAGAAACA GAAAATTGGG TATTTTATTA G
|
Protein sequence | MTKSWSVPFP ESETEHDGMP VFWRFQATVE EDGIKIFALQ YIAFHQTEHY AWLVPAHWIV NFKPAPNQWL QEWKQRRNRY AIKKVAKNAE RSFAFPTKKL AIESLLRRKK YHLMRIKQDL AVVSTLVDGM KNIDTSTPDI EYNFGHNQET ENWVFY
|
| |