| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3542 |
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| Symbol | |
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| ID | 6969408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3274252 |
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| End bp | 3274974 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643387342 |
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| Product | DNA-binding protein Roi |
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| Protein accession | YP_002271802 |
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| Protein GI | 209399228 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3645] Uncharacterized phage-encoded protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.206304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000000735314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTGAGT TAATAAATGG CAATGCCATC AAAATGACAA GCATTGAAAT CGCTGAGTTG
GTGGGTAAGC GTCATGACAA TGTGAAACGT ACCATCGAAA CGCTGGCTAA AAATGGTGTT
ATCCGGCTTC CTCAAATTGA GGTTTCCGAA AGAATCAATA ACTTAGGGTT CAATGTTCAG
TACGAGCATT ACGTCTTCGA AGGCGAACAA GGAAAGCGAG ACAGTATTGT CGTTGTAGCC
CAGCTGTCGC CGGAATTCAC CGCTCGCCTT GTTGACCGCT GGCGAGAGCT TGAAGAAGCT
GCGGTTAATA TCCCCAAAAC GCTACCAGAA GCGTTGCGCC TTGCTGCTGA TCTTGCTGAG
CAGAAAATGC AACTGGAAAA CCAGCTCGCA ATTGCCGCAC CTAAAGTTGA GTTTGCCGAT
CGCGTTGGCG AGGCCAGCGG AATTTTGATT GGAAACTTTG CAAAGGTTGT TGGTATTGGT
CCAAACAAAC TGTTTGCGTG GATGCGCGAT CACAAAATCC TTATTGCTTC AGGTGCCCGG
CGCAATGTGC CAATGCAGGA ATATATGGAT CGCGGCTATT TCACAGTGAA AGAAACAGCG
GTCAATACAA ATCACGGAAT ACAGATATCG TTCACCACAA AAATCACCGG GCGTGGTCAA
CAGTGGCTGA CAAGAAAGCT GCTAGATAAC GGAATGCTTA AAGTAACAGG GGAGGCTGCT
TAA
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| Protein sequence | MSELINGNAI KMTSIEIAEL VGKRHDNVKR TIETLAKNGV IRLPQIEVSE RINNLGFNVQ
YEHYVFEGEQ GKRDSIVVVA QLSPEFTARL VDRWRELEEA AVNIPKTLPE ALRLAADLAE
QKMQLENQLA IAAPKVEFAD RVGEASGILI GNFAKVVGIG PNKLFAWMRD HKILIASGAR
RNVPMQEYMD RGYFTVKETA VNTNHGIQIS FTTKITGRGQ QWLTRKLLDN GMLKVTGEAA
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