Gene ECH74115_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3526 
Symbol 
ID6970701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3267126 
End bp3267659 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID643387327 
Productlysozyme 
Protein accessionYP_002271790 
Protein GI209397830 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.68891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0000339599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGGA AATTCCGCTA TGGTTTATCA GCGGTAGTTC TGGCGCTGAT TGCCGCAGGT 
GCTTCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACG
GCATACCGTG ATGGTGTGGG TATCTGGACC ATCTGCCGTG GAGCCACCCG GGTGGATGGT
AAGCCTGTGA TTCCTGGCAT GAAGCTGTCG AAGGAAAAAT GCGACCGGGT TAACGCTATC
GAACGGGATA AGGCGCTGGC ATGGGTGGCG AAGAACATCA GAGTGCCACT GACTGAACCC
CAGAAAGCGG GTATTGCGTC ATTCTGTCCT TACAACATTG GCCCCGGTAA GTGTTTCCCG
TCGACGTTTT ATAAACGAAT TAATGCAGGT GATCGAAAAG GTGCCTGCGA AGCGATTCGC
TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATCCGCT CAAATAATTG CTACGGTCAG
GTATCAAGAC GTGACCAGGA GAGTGCGCTG TCATGCTGGG GTATCGACAG ATAA
 
Protein sequence
MSRKFRYGLS AVVLALIAAG ASAPEILDQF LDEKEGNHTT AYRDGVGIWT ICRGATRVDG 
KPVIPGMKLS KEKCDRVNAI ERDKALAWVA KNIRVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRINAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL SCWGIDR