Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3526 |
Symbol | |
ID | 6970701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3267126 |
End bp | 3267659 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643387327 |
Product | lysozyme |
Protein accession | YP_002271790 |
Protein GI | 209397830 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.68891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0000339599 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGGA AATTCCGCTA TGGTTTATCA GCGGTAGTTC TGGCGCTGAT TGCCGCAGGT GCTTCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACG GCATACCGTG ATGGTGTGGG TATCTGGACC ATCTGCCGTG GAGCCACCCG GGTGGATGGT AAGCCTGTGA TTCCTGGCAT GAAGCTGTCG AAGGAAAAAT GCGACCGGGT TAACGCTATC GAACGGGATA AGGCGCTGGC ATGGGTGGCG AAGAACATCA GAGTGCCACT GACTGAACCC CAGAAAGCGG GTATTGCGTC ATTCTGTCCT TACAACATTG GCCCCGGTAA GTGTTTCCCG TCGACGTTTT ATAAACGAAT TAATGCAGGT GATCGAAAAG GTGCCTGCGA AGCGATTCGC TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATCCGCT CAAATAATTG CTACGGTCAG GTATCAAGAC GTGACCAGGA GAGTGCGCTG TCATGCTGGG GTATCGACAG ATAA
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Protein sequence | MSRKFRYGLS AVVLALIAAG ASAPEILDQF LDEKEGNHTT AYRDGVGIWT ICRGATRVDG KPVIPGMKLS KEKCDRVNAI ERDKALAWVA KNIRVPLTEP QKAGIASFCP YNIGPGKCFP STFYKRINAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL SCWGIDR
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