Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3516 |
Symbol | |
ID | 6971127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3258683 |
End bp | 3259573 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643387317 |
Product | IS629, transposase orfB |
Protein accession | YP_002271780 |
Protein GI | 209399045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0367503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGGT ATGCAGCGAA CTGCATATTG CCCCGTCAAC GTATTACCAT TGTCAGCAAC AGCGACATCA TCCGGATAAA CGCAGTGCCC GTGCGCAGCA CGACGACTGG CTGAAGAGAG AGATACAGCG CGTATACGAT GAAAATCATC AGGTGTACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGAATC AGGGTGGCCA GATGTACAGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC AGCACATGGC AGGGCTTCGT CTATGTGGCG TTTATCATTG ATGTGTTTGC CGGATACATC GTGGGGTGGC GGGTCTCATC GTCTATGGAA ACGACATTCG TGCTGGATGC GCTGGAGCAG GCGTTGTGGG CCCGTCGTCC GTCTGGCACC ATCCATCACA GCGATAAAGG CTCTCAGTAT GTGTCACTGG CCTATACGGA GCGACTAAAA GAAGCCGGAT TACTGGCATC AACAGGGAGT ACAGGCGACT CGTATGACAA CGCGATGGCT GAGAGCATCA ATGGTCTTTA CAAAGCGGAG GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTAACGTGG GTGGACTGGT ATAACAATCG ACGATTGCTG GGAAGGCTGG GCCATACTCC TCCGGCAGAA GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
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Protein sequence | MMPLLDKLRE QYGVGPVCSE LHIAPSTYYH CQQQRHHPDK RSARAQHDDW LKREIQRVYD ENHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ ALWARRPSGT IHHSDKGSQY VSLAYTERLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE VIHRKSWKNR AEVELATLTW VDWYNNRRLL GRLGHTPPAE AEKAYYASIG NDDLAA
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