Gene ECH74115_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3490 
Symbol 
ID6969549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3232709 
End bp3233464 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID643387295 
Productlipoprotein, VacJ family 
Protein accessionYP_002271758 
Protein GI209399616 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC GCCTGTCGGC GCTTGCTCTG GGAACTACGC TTCTGGTGGG GTGTGCGAGT 
TCCGGTACAG ATCAGCAAGG GCGTTCTGAC CCGTTAGAAG GGTTCAACCG CACCATGTAC
AACTTTAACT TCAATGTATT AGACCCGTAT ATTGTTCGAC CGGTCGCTGT CGCCTGGCGT
GATTATGTTC CGCAACCGGC GCGTAACGGT TTGAGCAATT TTACCGGCAA CCTTGAAGAA
CCTGCGGTGA TGGTTAACTA CTTCTTGCAG GGCGACCCTT ATCAGGGGAT GGTCCACTTT
ACCCGCTTTT TCCTGAACAC CATTTTGGGG ATGGGCGGCT TTATTGATGT TGCAGGGATG
GCGAACCCGA AACTGCAACG GACTGAACCT CACCGCTTCG GTAGTACGCT TGGTCATTAT
GGCGTGGGTT ATGGCCCGTA CGTTCAATTA CCGTTCTACG GTAGCTTCAC GCTGCGTGAT
GACGGTGGTG ATATGGCGGA TGGTCTTTAC CCGGTTCTTT CCTGGCTGAC CTGGCCGATG
TCTGTGGGTA AATGGACGCT TGAAGGTATC GAAACCCGCG CACAGCTGCT GGATTCCGAC
GGTCTGCTGC GTCAGTCGTC CGATCCTTAT ATTATGGTGC GCGAAGCGTA CTTCCAGCGT
CATGATTTCA TCGCTAATGG CGGCGAACTC AAACCGCAGG AAAATCCGAA CGCGCAAGCG
ATTCAGGATG ATTTAAAAGA TATCGATTCT GAATAA
 
Protein sequence
MKLRLSALAL GTTLLVGCAS SGTDQQGRSD PLEGFNRTMY NFNFNVLDPY IVRPVAVAWR 
DYVPQPARNG LSNFTGNLEE PAVMVNYFLQ GDPYQGMVHF TRFFLNTILG MGGFIDVAGM
ANPKLQRTEP HRFGSTLGHY GVGYGPYVQL PFYGSFTLRD DGGDMADGLY PVLSWLTWPM
SVGKWTLEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGEL KPQENPNAQA
IQDDLKDIDS E