| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3462 |
|---|
| Symbol | |
|---|
| ID | 6972110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3206747 |
|---|
| End bp | 3207925 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643387269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002271732 |
|---|
| Protein GI | 209400286 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTG TAAGCCAAAC CGAAACACGA TCTTCTGCCA ATTTTTCGCT CTTCCGCATC
GCTTTTGCGG TTTTTCTCAC CTACATGACC GTAGGGTTGC CGTTGCCGGT TATCCCGTTG
TTTGTTCATC ATGATCTGGG CTATGGCAAT ACCATGGTCG GCATTGCCGT CGGCATTCAG
TTTCTGGCTA CGGTGCTGAC GCGTGGCTAT GCCGGGCGAC TGGCCGATCA ATATGGCGCA
AAACGTTCGG CGCTTCAGGG GATGTTAGCT TGTGGTCTGG CTGGCGGCGC GTTGCTGCTG
GCGGCGATTT TGCCTGTCTC CGCACCGTTC AAATTTGCCC TGTTGGTCAT CGGGCGTTTG
ATTCTTGGGT TTGGTGAAAG CCAGTTACTG ACAGGCGCTC TGACCTGGGG GTTAGGCATC
GTAGGGCCAA AACACTCTGG CAAAGTGATG TCATGGAATG GAATGGCGAT TTACGGTGCC
CTCGCTGTTG GTGCTCCGCT TGGCCTGTTG ATTCATAGCC ATTACGGTTT TGCCGCACTG
GCGCTCACCA CAATGGCATT ACCCTTACTG GCGTGGGCCT GTAACGGCAC AGTGCGCAAA
GTACCAGCCC TGGCGGGAGA ACGTCCATCT CTGTGGAGCG TTGTCGGACT TATCTGGAAA
CCAGGGTTAG GTCTGGCACT ACAAGGCGTT GGTTTTGCGG TTATCGGGAC TTTCGTTTCG
CTCTACTTTG CCAGCAAAGG ATGGGCGATG GCGGGCTTTA CTCTTACCGC GTTTGGCGGC
GCATTTGTCG TGATGCGCGT CATGTTTGGC TGGATGCCGG ACCGTTTTGG CGGCGTGAAA
GTGGCGATTG TCTCTCTGCT TGTAGAAACG GTGGGCTTGT TGCTGCTCTG GCAAGCCCCA
GGGGCGTGGG TCGCATTAGC GGGCGCGGCG TTAACCGGAG CCGGATGTTC GCTTATCTTT
CCTGCGCTGG GTGTGGAGGT GGTTAAACGC GTCCCCTCAC AAGTTCGCGG CACCGCACTG
GGCGGTTACG CCGCGTTTCA GGATATCGCC CTCGGCGTCT CCGGGCCGCT TGCGGGAATG
CTGGCGACCA CGTTTGGTTA CTCTTCGGTA TTTCTTGCCG GGGCGATCTC TGCGGTGCTG
GGAATTATTG TCACGATACT GTCGTTTCGT CGGGGTTAA
|
|---|
| Protein sequence | MTAVSQTETR SSANFSLFRI AFAVFLTYMT VGLPLPVIPL FVHHDLGYGN TMVGIAVGIQ
FLATVLTRGY AGRLADQYGA KRSALQGMLA CGLAGGALLL AAILPVSAPF KFALLVIGRL
ILGFGESQLL TGALTWGLGI VGPKHSGKVM SWNGMAIYGA LAVGAPLGLL IHSHYGFAAL
ALTTMALPLL AWACNGTVRK VPALAGERPS LWSVVGLIWK PGLGLALQGV GFAVIGTFVS
LYFASKGWAM AGFTLTAFGG AFVVMRVMFG WMPDRFGGVK VAIVSLLVET VGLLLLWQAP
GAWVALAGAA LTGAGCSLIF PALGVEVVKR VPSQVRGTAL GGYAAFQDIA LGVSGPLAGM
LATTFGYSSV FLAGAISAVL GIIVTILSFR RG
|
|---|
| |