Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3448 |
Symbol | hisQ |
ID | 6969358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3192762 |
End bp | 3193448 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643387254 |
Product | histidine ABC transporter, permease protein HisQ |
Protein accession | YP_002271717 |
Protein GI | 209398746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.869706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTATG GGTTTTCAGG TGTTATTTTA CAGGGTGCGC TCGTCACGCT GGAGCTGGCT ATCAGCTCTG TAGTGCTCGC TGTAATCATC GGTTTAATTG GCGCTGGCGG TAAGCTCTCG CAAAATCGGC TTTCGGGGCT GATTTTCGAA GGGTACACCA CGCTGATTCG TGGCGTGCCG GACTTAGTGT TGATGCTGCT GATTTTCTAC GGTTTGCAGA TTGCGCTAAA CACGGTGACG GAGGCGATGG GCGTCGGGCA GATTGATATC GATCCGATGG TCGCTGGTAT TATCACTCTC GGTTTTATCT ACGGTGCTTA TTTTACCGAA ACGTTCCGTG GTGCTTTTAT GGCAGTGCCG AAAGGACATA TAGAGGCGGC GAGGGCGTTC GGTTTTACTC GTGGGCAAGT GTTTCGGCGG ATCATGTTTC CGGCGATGAT GCGTTACGCC CTGCCAGGCA TTGGCAACAA CTGGCAGGTG ATCCTCAAAT CTACCGCACT GGTTTCGTTA CTCGGCCTGG AAGATGTGGT CAAAGCCACG CAGCTGGCAG GCAAAAGTAC CTGGGAACCG TTCTATTTCG CTATCGTCTG TGGCGTGATT TACCTGGTTT TCACCACCGT TTCCAATGGT GTGCTGCTGT TCCTTGAGCG CCGCTACTCT GTGGGTGTGA AGAGGGCTGA CCTGTGA
|
Protein sequence | MLYGFSGVIL QGALVTLELA ISSVVLAVII GLIGAGGKLS QNRLSGLIFE GYTTLIRGVP DLVLMLLIFY GLQIALNTVT EAMGVGQIDI DPMVAGIITL GFIYGAYFTE TFRGAFMAVP KGHIEAARAF GFTRGQVFRR IMFPAMMRYA LPGIGNNWQV ILKSTALVSL LGLEDVVKAT QLAGKSTWEP FYFAIVCGVI YLVFTTVSNG VLLFLERRYS VGVKRADL
|
| |