Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3447 |
Symbol | hisM |
ID | 6967486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3192049 |
End bp | 3192765 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643387253 |
Product | histidine ABC transporter, permease protein HisM |
Protein accession | YP_002271716 |
Protein GI | 209398320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.885693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAA TCTTACATGA ATACTGGAAA CCGCTGCTGT GGACCGACGG TTATCGCTTT ACTGGTGTGG CGATCACTCT GTGGCTGCTT ATTTTGTCGG TAGTGATAGG CGGAGTCCTG GCGCTGTTTC TGGCGATTGG TCGTGTCTCC AGTAATAAAT ACATCCAGTT TCCAATCTGG TTATTTACCT ATATTTTTCG CGGTACGCCG CTGTATGTTC AGTTGCTGGT GTTCTATTCC GGCATGTATA CGCTGGAGAT TGTTAAGGGG ACCGAGTTTC TTAACGCCTT TTTCCGCAGT GGCCTGAACT GTACCGTGCT GGCGCTGACG CTTAACACCT GCGCTTACAC TACCGAGATT TTTGCTGGGG CAATCCGTTC GGTGCCGCAT GGGGAAATTG AAGCCGCCAG AGCCTATGGC TTCTCGACTT TTAAAATGTA TCGCTGCATT ATTTTGCCTT CTGCGCTGCG TATTGCGTTA CCGGCATACA GCAACGAAGT GATCCTGATG CTGCACTCTA CTGCGTTGGC ATTTACTGCC ACGGTGCCGG ATCTGCTGAA AATAGCCCGC GATATTAACG CCGCCACGTA TCAACCTTTT ACCGCCTTCG GCATTGCCGC GGTGCTCTAT TTAATCATCT CTTATGTCCT GATCAGCCTC TTTCGCAGAG CGGAAAAACG CTGGTTGCAG CATGTGAAAC CTTCTTCAAC GCACTGA
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Protein sequence | MIEILHEYWK PLLWTDGYRF TGVAITLWLL ILSVVIGGVL ALFLAIGRVS SNKYIQFPIW LFTYIFRGTP LYVQLLVFYS GMYTLEIVKG TEFLNAFFRS GLNCTVLALT LNTCAYTTEI FAGAIRSVPH GEIEAARAYG FSTFKMYRCI ILPSALRIAL PAYSNEVILM LHSTALAFTA TVPDLLKIAR DINAATYQPF TAFGIAAVLY LIISYVLISL FRRAEKRWLQ HVKPSSTH
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