Gene ECH74115_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3429 
Symbol 
ID6967894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3175093 
End bp3176310 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID643387236 
Productaminotransferase AlaT 
Protein accessionYP_002271699 
Protein GI209395758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.412347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TTGAAAAATC CAGCAAATTA GAGAATGTCT GTTATGACAT CCGTGGTCCG 
GTGCTGAAAG AAGCAAAACG CCTGGAAGAA GAAGGTAACA AGGTACTGAA ACTGAACATC
GGCAACCCAG CCCCGTTCGG TTTTGACGCG CCAGATGAAA TCCTCGTTGA CGTGATACGC
AACCTGCCTA CCGCTCAAGG GTATTGCGAT TCCAAAGGTC TTTACTCCGC GCGTAAAGCC
ATCATGCAGC ACTATCAGGC TCGTGGCATG CGTGATGTTA CCGTGGAAGA TATTTACATC
GGCAATGGTG TATCGGAGCT TATCGTTCAG GCAATGCAGG CATTGCTGAA CAGCGGGGAC
GAAATGTTGG TTCCTGCACC AGATTACCCA CTATGGACCG CGGCGGTTTC GCTTTCCAGC
GGTAAAGCGG TGCATTATCT TTGCGATGAA TCCTCTGACT GGTTCCCGGA CCTCGATGAT
ATTCGCGCTA AAATTACGCC TCGTACGCGT GGGATCGTTA TTATCAACCC AAATAACCCA
ACCGGCGCGG TATATTCCAA AGAGCTTTTA ATGGAGATTG TGGAGATTGC ACGTCAGCAT
AATCTCATTA TCTTCGCCGA TGAAATTTAT GACAAAATTC TCTACGACGA CGCTGAGCAT
CACTCAATTG CGCCGCTGGC ACCTGACCTG CTGACCATTA CCTTTAATGG ACTGTCGAAA
ACGTACCGCG TTGCAGGCTT CCGTCAGGGG TGGATGGTGT TGAACGGGCC GAAAAAACAC
GCCAAAGGCT ACATCGAAGG TCTGGAAATG CTGGCTTCAA TGCGCCTGTG TGCTAACGTT
CCTGCGCAAC ACGCCATTCA GACCGCGCTG GGTGGTTATC AGAGCATCAG TGAATTTATT
ACCCCTGGCG GTCGTCTTTA TGAGCAGCGT AACCGCGCGT GGGAATTGAT CAACGATATT
CCGGGCGTTT CCTGCGTGAA ACCTTGTGGT GCGCTGTACA TGTTCCCGAA AATCGACGCC
AAACGCTTTA ACATTCACGA CGATCAGAAA ATGGTGCTGG ATTTCCTGTT GCAGGAAAAA
GTTCTGTTGG TGCAAGGGAC GGCATTCAAC TGGCCGTGGC CGGATCACTT CCGCATTGTC
ACGCTACCGC GTGTCGATGA TATCGAGCTG TCGTTGAGCA AGTTCGCGCG TTTCCTTTCT
GGTTATCATC AGCTGTAA
 
Protein sequence
MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA PDEILVDVIR 
NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD
EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP
TGAVYSKELL MEIVEIARQH NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI
TPGGRLYEQR NRAWELINDI PGVSCVKPCG ALYMFPKIDA KRFNIHDDQK MVLDFLLQEK
VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS GYHQL