Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3407 |
Symbol | menF |
ID | 6971074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3151223 |
End bp | 3152518 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643387215 |
Product | isochorismate synthase, menaquinone-specific |
Protein accession | YP_002271678 |
Protein GI | 209400654 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.170921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAATCAC TTACTACGGC GCTGGAAAAT CTACTGCGCC ATTTGTCGCA AGAGATTCCG GCGACACCCG GCATTCGGGT TATCGATATT CCTTTCCCTC TCAAAGACGC TTTTGATGCC TTGAGCTGGC TGGCCAGTCA GCAAACGTAC CCGCAATTCT ACTGGCAACA ACGTAATGGT GATGAAGAAG CTGCCGTCCT GGGCGCGATT ACCCGTTTTA CGTCGTTGGA CCAGGCACAA CGTTTTCTTC GCCAGCACCC GGAACACGCC GACTTACGCA TTTGGGGGCT GAATGCGTTT GACCCGTCGC AGGGCAATTT ACTTTTACCA CGCCTGGAAT GGCGACGCTG TGGCGGTAAA GCCACGCTGC GGCTGACGCT ATTCAGCGAA AGCTCCCTTC AGCACGATGC GATTAAGGCA AGAGAATTTA TCGCCACACT GGTGAGTATC AAGCCCTTGC CTGGGTTACA TTTAACCACT ACGCGAGAAC AACACTGGCC GGACAAAACG GGCTGGACGC AATTAATCGA ACTGGCAACG AAAACCATCG CCGAAGGTGA GCTCGACAAA GTGGTGCTTG CTCGGGCAAC TGACCTGCAT TTCGCAAGTC CGGTCAATGC GGCGGCGATG ATGGCTGCCA GTCGTCGACT GAATCTCAAT TGCTACCATT TTTACATGGC CTTTGATGGC GAAAATGCTT TTCTTGGCTC TTCACCGGAA CGGTTATGGC GGCGGCGTGA CAAAGCGCTG CGTACTGAAG CGCTGGCGGG AACAGTAGCA AATCATCCTG ATGATAAGCA GGCGCAGCAG TTAGGAGAGT GGCTGATGGC GGATGATAAA AACCAGCGCG AGAACATGCT GGTGGTGGAA GATATCTGCC AACGATTACA GGCCGATACC CAGACGCTGG ATGTTTTACC GCCGCAGGTA CTGCGTCTGC GTAAAGTGCA GCATCTTCGC CGCTGTATCT GGACTTCACT CAACAAAGCG GATGATGTGA TCTGTTTACA TCAGTTGCAG CCAACGGCAG CAGTTGCTGG CTTACCGCGC GATCTGGCGC GACAGTTTAT CGCCCATCAC GAACCGTTCA CCCGAGAATG GTACGCCGGT TCTGCGGGCT ATCTCTCATT ACAACAAAGC GAATTCTGCG TTTCCCTGCG CTCAGCAAAA ATCAGCGGCA ATGTCGTGCG GCTATATGCT GGCGCGGGCA TTGTCCGTGG TTCCGACCCC GAGCAAGAGT GGCAGGAAAT CGACAACAAA GCGGCAGGGC TGCGTACTTT ATTACAAATG GAATAG
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Protein sequence | MQSLTTALEN LLRHLSQEIP ATPGIRVIDI PFPLKDAFDA LSWLASQQTY PQFYWQQRNG DEEAAVLGAI TRFTSLDQAQ RFLRQHPEHA DLRIWGLNAF DPSQGNLLLP RLEWRRCGGK ATLRLTLFSE SSLQHDAIKA REFIATLVSI KPLPGLHLTT TREQHWPDKT GWTQLIELAT KTIAEGELDK VVLARATDLH FASPVNAAAM MAASRRLNLN CYHFYMAFDG ENAFLGSSPE RLWRRRDKAL RTEALAGTVA NHPDDKQAQQ LGEWLMADDK NQRENMLVVE DICQRLQADT QTLDVLPPQV LRLRKVQHLR RCIWTSLNKA DDVICLHQLQ PTAAVAGLPR DLARQFIAHH EPFTREWYAG SAGYLSLQQS EFCVSLRSAK ISGNVVRLYA GAGIVRGSDP EQEWQEIDNK AAGLRTLLQM E
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