| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3405 |
|---|
| Symbol | |
|---|
| ID | 6971029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3148709 |
|---|
| End bp | 3149467 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643387213 |
|---|
| Product | acyl-CoA thioester hydrolase YfbB |
|---|
| Protein accession | YP_002271676 |
|---|
| Protein GI | 209400623 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0367358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGC ACGCGCAGGC AAAACACGGC AAACCAGGTT TACCCTGGCT GGTGTTTTTG
CACGGTTTTT CCGGCGATTG CCTCGAATGG CAGGAAGTCG GCGAGGCGTT TGCCGACTAC
TCACGGTTGT ATGTTGATCT CCCAGGTCAC GGTGGTTCGG CGGCGATTAG CGTCGATGGA
TTTGATGATG TCACCGACTT ACTGCGTAAA ACCCTGGTTA GTTACAACAT CCTTAGCTTC
TGGCTGGTGG GGTACTCGCT TGGCGGACGG GTGGCGATGA TGGCCGCTTG CCAGGGGCTG
GCGGGGCTTT GTGGGGTTGT TGTCGAAGGC GGTCATCCGG GGCTGCAAAA TGCTGAACAA
CGCGCGGAAC GTCAGCGTTC CGATCGCCAA TGGGCGCAGC GTTTTCGTTC CGAACCATTA
ACCGCGGTAT TTGCCGACTG GTATCAACAG CCTGTTTTTG CCTCGCTCAA TGACGATCAA
CGCCGGGAGC TGGTGGTGCT GCGCAGCAAC AATAATGGCG CAACCCTTGC CGCCATGCTG
GAGGCGACTT CTCTCGCCGT CCAGCCTGAT TTACGTGCTA ACCTTAGCGC CCGCACATTT
GCGTTTTATT ATTTATGTGG TGAACGTGAC AGCAAATTCC GCGCCCTGGC GGCGGAACTG
GCTGCCGACT GCCATGTCAT TCCTCGCGCC GGACATAACG CGCATCGGGA AAATCCCGCT
GGCGTAATCG CAAGTCTGGC GCAGATCTTG CGTTTCTGA
|
|---|
| Protein sequence | MILHAQAKHG KPGLPWLVFL HGFSGDCLEW QEVGEAFADY SRLYVDLPGH GGSAAISVDG
FDDVTDLLRK TLVSYNILSF WLVGYSLGGR VAMMAACQGL AGLCGVVVEG GHPGLQNAEQ
RAERQRSDRQ WAQRFRSEPL TAVFADWYQQ PVFASLNDDQ RRELVVLRSN NNGATLAAML
EATSLAVQPD LRANLSARTF AFYYLCGERD SKFRALAAEL AADCHVIPRA GHNAHRENPA
GVIASLAQIL RF
|
|---|
| |