| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3402 |
|---|
| Symbol | menE |
|---|
| ID | 6966794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3145523 |
|---|
| End bp | 3146878 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643387210 |
|---|
| Product | O-succinylbenzoic acid--CoA ligase |
|---|
| Protein accession | YP_002271673 |
|---|
| Protein GI | 209397084 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.671399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCT CTGACTGGCC GTGGCGTCAC TGGCGGCAAG TGCGGGGAGA AGCCATCGCC
TTACGTCTTA ATGACGAGCA ACTCAACTGG CGCGAGCTTT GTGCTCGCGT CGATGAATTA
GCCTCCGGAT TTGCGGTGCA GGGTGTGGTT GAGGACAGCG GCGTGATGTT GCGGGCGTGG
AATACGCCGC AAACGCTGCT CGCTTGGCTG GCGTTACTGC AATGCGGGGC GCGGGTGTTG
CCCGTGAACC CTCAGCTGCC GCAACCGTTG CTTGAAGAAT TGCTGCCCAA TCTGACGCTG
CAATTTGCGC TGGTGCCGGA TGGGGAAAAC ACGTTTCCGG CATTAACGTC GCTGCACATT
CAGCGGGTTG AAGGCGCACA TGTCGCTACG TGGCAGCCGA CGCGTCTGTG CTCAATGACG
TTGACCTCGG GTTCTACCGG GTTGCCGAAA GCCGCTGTCC ATACTTATCA GGCCCATCTT
GCCAGTGCCG AAGGGGTGTT ATCGCTGATT CCGTTTGGCG ATCACGATGA CTGGTTGCTC
TCTTTACCGC TGTTTCACGT CTCCGGTCAG GGAATTATGT GGCGCTGGTT ATACGCTGGT
GCGCGGATGA CGGTGCGTGA TAAACAGCCA TTGGAGCAAA TGCTGGCAGG CTGTACTCAC
GCTTCACTGG TGCCAACACA ACTCTGGCGT TTGCTGGTTA ACCGCAGTTC CGTTTCCCTG
AAAGCGGTGT TACTTGGCGG CGCGGCTATC CCGGTCGAGT TGACGGAACA GGCGCGCGAG
CAGGGGATTC GTTGCTTTTG CGGCTATGGT CTGACCGAGT TTGCCTCCAC GGTGTGTGCG
AAAGAAGCCG ACGGCCTGGC AGACGTTGGT TCGCCGCTGC CGGGTCGGGA AGTGAAAATC
GTTAATAATG AAGTGTGGCT GCGGGCTGCC AGTATGGCAG AAGGTTACTG GCGTAACGGG
CAACTGGTTT CACTGGTTAA TGACGAAGGC TGGTACGCTA CGCGCGATCG CGGTGAGATG
CATAATGGCA AGCTGACCAT TGTCGGACGT TTAGACAATC TATTCTTCAG TGGCGGAGAG
GGTATTCAGA CGGAAGAAGT CGAGCGCGTA ATTGCTGCAC ATCCTGCGGT TTTGCAGGTG
TTTATCGTCC CCGTTGCCGA CAAGGAGTTT GGTCATCGAC CGGTGGCGGT GATGGAGTAT
GACCACGAGA GCGTTGATCT TAGTGAATGG GTGAAAGATA AGCTGGCCCG TTTTCAGCAA
CCGGTACGTT GGCTGACTTT GCCGCCGGAG CTGAAAAACG GCGGTATTAA AATTTCACGT
CAGGCGCTAA AAGAGTGGGT GCAACGTCAG CAATAA
|
|---|
| Protein sequence | MIFSDWPWRH WRQVRGEAIA LRLNDEQLNW RELCARVDEL ASGFAVQGVV EDSGVMLRAW
NTPQTLLAWL ALLQCGARVL PVNPQLPQPL LEELLPNLTL QFALVPDGEN TFPALTSLHI
QRVEGAHVAT WQPTRLCSMT LTSGSTGLPK AAVHTYQAHL ASAEGVLSLI PFGDHDDWLL
SLPLFHVSGQ GIMWRWLYAG ARMTVRDKQP LEQMLAGCTH ASLVPTQLWR LLVNRSSVSL
KAVLLGGAAI PVELTEQARE QGIRCFCGYG LTEFASTVCA KEADGLADVG SPLPGREVKI
VNNEVWLRAA SMAEGYWRNG QLVSLVNDEG WYATRDRGEM HNGKLTIVGR LDNLFFSGGE
GIQTEEVERV IAAHPAVLQV FIVPVADKEF GHRPVAVMEY DHESVDLSEW VKDKLARFQQ
PVRWLTLPPE LKNGGIKISR QALKEWVQRQ Q
|
|---|
| |