| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3396 |
|---|
| Symbol | arnA |
|---|
| ID | 6969474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3139914 |
|---|
| End bp | 3141896 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643387204 |
|---|
| Product | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase |
|---|
| Protein accession | YP_002271667 |
|---|
| Protein GI | 209399006 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG TCGTTTTTGC CTACCACGAT ATGGGATGCC TCGGTATTGA AGCCCTGCTG
GCTGCCGGTT ACGAAATTAG CGCCATTTTT ACCCATACCG ATAATCCCGG TGAAAAAGCC
TTTTATGGTT CGGTGGCTCG TCTGGCGGCG GAAAGAGGCA TTCCGGTTTA TGCGCCGGAT
AACGTTAATC ATCCGCTGTG GGTGGAACGC ATTGCCCAAC TCTCACCAGA GGTGATTTTC
TCTTTTTATT ATCGCCATCT TATTTGCGAC GAGATTTTGC AGCTCGCTCC CGCAGGTGCA
TTTAATCTGC ACGGTTCGCT GTTACCAAAA TATCGTGGTC GCGCGCCGCT GAACTGGGTG
CTGGTGAACG GTGAAACAGA AACTGGCGTT ACATTGCACC GAATGGTAAA ACGTGCCGAT
GCCGGGGCCA TTGTGGCGCA ACTGCGCGTT GCCATTGCGC CAGACGATAT CGCTATTACG
CTGCATCATA AATTGTGCCA TGCCGCGCGC CAGCTACTGG AACAGACATT ACCCGCCATT
AAACACGGTA ATATTCTGGA AATCGCCCAG CGCGAAAACG AAGCCACCTG TTTTGGTCGC
AGAACGCCGG ATGACAGTTT CCTCGAATGG CATAAGCCGG CATCCGTACT GCACAACATG
GTACGTGCCG TTGCCGATCC GTGGCCGGGT GCCTTCAGCT ATGTTGGCAA TCAGAAATTC
ACCGTCTGGT CGTCGCGTGT TCATCCTCAT GCCAGCAAAG CACAGCCGGG GAGCGTGATT
TCTGTTGCGC CACTGCTGAT TGCCTGTGGC GATGGCGCGC TGGAAATCGT CACCGGACAA
GCGGGCGACG GCATTACTAT GCAGGGCTCG CAATTAGCGC AGACGCTGGG CCTGGTGCAA
GGTTCACGCT TGAATAGCCA GCCTGCCTGC ACCGCCCGAC GCCGTACCCG GGTACTCATC
CTCGGGGTGA ATGGCTTTAT TGGCAACCAT CTGACAGAAC GCCTGCTGCG CGAAGATCAT
TATGAAGTTT ACGGTCTGGA TATTGGCAGC GATGCGATAA GCCGTTTTCT GAATCATCCG
CATTTTCACT TTGTCGAAGG CGATATCAGT ATTCATTCCG AATGGATTGA GTATCACGTC
AAAAAATGTG ATGTCGTCTT GCCGCTGGTG GCGATAGCCA CGCCGATTGA ATATACCCGC
AACCCGCTGC GCGTATTTGA ACTCGATTTT GAAGAGAATC TGCGCATTAT CCGCTACTGC
GTGAAGTACC GTAAGCGAAT CATCTTCCCG TCAACTTCAG AAGTTTATGG GATGTGTAGC
GATAAATACT TCGATGAGGA CCATTCTAAT TTAATCGTCG GCCCGGTGAA TAAACCACGC
TGGATTTATT CGGTATCAAA ACAATTACTT GATCGGGTGA TCTGGGCCTA TGGCGAAAAA
GAGGGTTTAC AGTTCACCCT CTTCCGCCCG TTTAACTGGA TGGGACCACG ACTGGATAAC
CTTAATGCGG CACGAATCGG CAGCTCCCGC GCGATTACGC AACTCATTCT CAATCTGGTA
GAAGGTTCAC CGATTAAGCT GATTGATGGC GGAAAACAAA AACGCTGCTT TACTGATATT
CGCGATGGTA TCGAGGCGTT ATACCGCATT ATCGAAAATG CGGGAAATCG CTGCGACGGC
GAAATTATCA ACATTGGCAA TCCTGAGAAC GAAGCGAGCA TTGAGGAACT GGGCGAGATG
CTGCTGGCGA GCTTCGAAAA ACATCCGCTG CGCCATCATT TCCCACCGTT TGCGGGCTTT
CGCGTTGTCG AAAGTAGCAG CTACTACGGC AAAGGATATC AGGACGTAGA GCATCGTAAA
CCGAGCATCC GCAATGCCCA CCACTGCCTG GACTGGGAGC CGAAAATTGA TATGCAGGAA
ACCATCGACG AAACGCTGGA TTTCTTCCTG CGCACCGTTG ATCTTACGGA TAAACCATCA
TGA
|
|---|
| Protein sequence | MKTVVFAYHD MGCLGIEALL AAGYEISAIF THTDNPGEKA FYGSVARLAA ERGIPVYAPD
NVNHPLWVER IAQLSPEVIF SFYYRHLICD EILQLAPAGA FNLHGSLLPK YRGRAPLNWV
LVNGETETGV TLHRMVKRAD AGAIVAQLRV AIAPDDIAIT LHHKLCHAAR QLLEQTLPAI
KHGNILEIAQ RENEATCFGR RTPDDSFLEW HKPASVLHNM VRAVADPWPG AFSYVGNQKF
TVWSSRVHPH ASKAQPGSVI SVAPLLIACG DGALEIVTGQ AGDGITMQGS QLAQTLGLVQ
GSRLNSQPAC TARRRTRVLI LGVNGFIGNH LTERLLREDH YEVYGLDIGS DAISRFLNHP
HFHFVEGDIS IHSEWIEYHV KKCDVVLPLV AIATPIEYTR NPLRVFELDF EENLRIIRYC
VKYRKRIIFP STSEVYGMCS DKYFDEDHSN LIVGPVNKPR WIYSVSKQLL DRVIWAYGEK
EGLQFTLFRP FNWMGPRLDN LNAARIGSSR AITQLILNLV EGSPIKLIDG GKQKRCFTDI
RDGIEALYRI IENAGNRCDG EIINIGNPEN EASIEELGEM LLASFEKHPL RHHFPPFAGF
RVVESSSYYG KGYQDVEHRK PSIRNAHHCL DWEPKIDMQE TIDETLDFFL RTVDLTDKPS
|
|---|
| |