| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3379 |
|---|
| Symbol | glpB |
|---|
| ID | 6969063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3124999 |
|---|
| End bp | 3126258 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643387188 |
|---|
| Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
|---|
| Protein accession | YP_002271651 |
|---|
| Protein GI | 209397429 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTTG ATACTATCAT TATGGGCGGC GGCCTCGCCG GATTACTCTG TGGCCTGCAG
CTGCAAAAAC ACGGCCTGCG CTGTGCCATT GTCACGCGTG GTCAAAGCGC GCTGCATTTC
TCATCCGGTT CGCTGGATTT GCTGAGCCAT CTGCCAGATG GTCAAGCTGT GACAGACATT
CACAGTGGAC TGGAATCTTT GCGTCAGCAG GCACCTGCAC ATCCTTACTC TCTTCTCGGG
CCACAACGCG TGCTCGATCT CGCTTGCCAG GCGCAGGCAT TAATCGCTGA AAGCGGTGCG
CAATTGCAGG GCAGCGTAGA ACTGCCTCAC CAGCGGATTA CGCCGCTCGG CACTCTGCGC
TCTACCTGGC TAAGTTCGCC AGAAGTCCCC GTCTGGCCGC TGCCCGCGAA GAAAATATGT
GTAGTGGGAA TTAGCGGACT GATGGATTTT CAGGCGCACC TTGCGGCAGC TTCGTTGCGT
GAACTCGACC TTGCCGTTGA AACCGCAGAA ATAGAGCTGC CGGAACTGGA TGTCCTGCGC
AATAACGCCA CCGAGTTCCG CGCGGTGAAT ATCGCCCGTT TCCTTGATAA TGAAGAAAAC
TGGCCGCTGT TACTTGATGC GCTTATTCCT GTCGCCAATA CCTGCGAAAT GATCCTGATG
CCCGCCTGCT TCGGCCTGGC TGATGACAAA CTGTGGCGTT GGTTGAATGA AAAACTACCT
TGTTCACTGA TGCTTTTGCC AACGCTGCCG CCTTCCGTGC TGGGCATTCG TCTGCAAAAC
CAGTTACAGC GCCAGTTTGT GCGTCAGGGT GGCGTGTGGA TGCCGGGCGA TGAAGTGAAA
AAAGTGACCT GTAAAAATGG CGTAGTGAAT GAAATCTGGA CCCGCAATCA CGCCGATATC
CCGCTGCGTC CACGTTTCGC GGTTCTCGCC AGCGGCAGTT TCTTTAGTGG CGGACTGGTA
GCGGAACGTA ACGGCATTCG AGAGCCGATT CTCGGCCTTG ATGTGCTACA AACCGCCACG
CGGGGTGAAT GGTATAAGGG AGATTTTTTT GCGCCGCAAC CGTGGCAGCA GTTCGGTGTA
ACCACTGATC AGACGCTACG CCCGTCGCAG GCAGGGCAAA CCATCGAAAA CCTGTTTACC
ATCGGTTCGG TGCTGGGCGG ATTTGATCCC ATCGCCCAGG GATGCGGCGG CGGTGTTTGT
GCCGTCAGTG CTTTACATGC CGCTCAACAG ATTGCCCAAC GCGCAGGAGG CCAACAATGA
|
|---|
| Protein sequence | MRFDTIIMGG GLAGLLCGLQ LQKHGLRCAI VTRGQSALHF SSGSLDLLSH LPDGQAVTDI
HSGLESLRQQ APAHPYSLLG PQRVLDLACQ AQALIAESGA QLQGSVELPH QRITPLGTLR
STWLSSPEVP VWPLPAKKIC VVGISGLMDF QAHLAAASLR ELDLAVETAE IELPELDVLR
NNATEFRAVN IARFLDNEEN WPLLLDALIP VANTCEMILM PACFGLADDK LWRWLNEKLP
CSLMLLPTLP PSVLGIRLQN QLQRQFVRQG GVWMPGDEVK KVTCKNGVVN EIWTRNHADI
PLRPRFAVLA SGSFFSGGLV AERNGIREPI LGLDVLQTAT RGEWYKGDFF APQPWQQFGV
TTDQTLRPSQ AGQTIENLFT IGSVLGGFDP IAQGCGGGVC AVSALHAAQQ IAQRAGGQQ
|
|---|
| |