| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3350 |
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| Symbol | alkB |
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| ID | 6970378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3083040 |
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| End bp | 3083690 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643387162 |
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| Product | alkylated DNA repair protein AlkB |
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| Protein accession | YP_002271625 |
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| Protein GI | 209398419 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0925721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGATC TGTTTGCCGA TGCTGAACCG TGGCAAGAGC CACTGGCGGC TGGTGCGGTA
ATTTTACGGC GTTTTGCTTT TAACGCTGCA GAGCAACTAA TCCGCGATAT TAATGACGTT
GCCAGCCAGT CGCCGTTTCG CCAGATGGTC ACCCCCGGGG GATATACCAT GTCGGTGGCG
ATGACCAACT GTGGGCATCT GGGCTGGACG ACCCATCGGC AAGGTTATCT CTATTCGCCC
ATTGATCCGC AAACAAATAA ACCGTGGCCC GCCATGCCGC AGAGTTTTCA TAATTTATGT
CAACGTGCGG CTACGGCGGC GGGCTATCCA GATTTCCAGC CAGATGCTTG TCTTATCAAC
CGCTACGCTC CTGGCGCGAA ACTGTCGCTG CATCAGGATA AAGACGAACC GGATCTGCGC
GCGCCAATTG TTTCTGTTTC TCTGGGCTTA CCCGCGATTT TTCAATTTGG TGGCCTGAAA
CGTAATGATC CGCTCAAACG TTTGTTGTTG GAACATGGCG ATGTGGTGGT ATGGGGCGGT
GAATCGCGGC TGTTTTATCA CGGTATTCAA CCGTTGAAAG CGGGGTTTCA TCCACTCACC
ACCGACTGCC GCTACAACCT GACATTCCGT CAGGCAGGTA AAAAAGAATA A
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| Protein sequence | MLDLFADAEP WQEPLAAGAV ILRRFAFNAA EQLIRDINDV ASQSPFRQMV TPGGYTMSVA
MTNCGHLGWT THRQGYLYSP IDPQTNKPWP AMPQSFHNLC QRAATAAGYP DFQPDACLIN
RYAPGAKLSL HQDKDEPDLR APIVSVSLGL PAIFQFGGLK RNDPLKRLLL EHGDVVVWGG
ESRLFYHGIQ PLKAGFHPLT TDCRYNLTFR QAGKKE
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