| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3338 |
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| Symbol | ccmA |
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| ID | 6971418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3071936 |
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| End bp | 3072553 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387150 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_002271613 |
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| Protein GI | 209396482 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAAG TCAGAGAGTT ACTTTGTGAG CGGGATGAAC GAACCTTATT TAGTGGCTTG
TCATTTACGC TGAACGCAGG AGAGTGGGTA CAAATCACCG GTAGCAACGG CGCGGGGAAG
ACAACGCTTC TCCGTTTGCT GACGGGGTTG TCTCGCCCTG ACGCAGGCGA GGTTCTCTGG
CAAGGGCAGC CCTTGCATCA GGTACGCGAC AGCTACCATC AAAACCTGTT ATGGATAGGC
CATCAGCCGG GGATCAAAAC CCGGCTGACG GCGTTAGAAA ATCTGCACTT TTATCATCGC
GATGGCGATA CCGCACAATG TCTGGAAGCC CTGGCGCAGG CCGGGCTTGC CGGATTCGAA
GATATTCCGG TAAATCAACT TTCTGCCGGG CAACAACGCC GCGTCGCTTT AGCGCGTCTG
TGGCTGACCC GTGCCACGTT ATGGATCCTC GACGAGCCTT TTACCGCGAT TGACGTTAAC
GGCGTCGATC GTCTGACCCA GCGTATGGCG CAGCATACAG AGCAGGGGGG GATTGTGATT
CTCACTACCC ACCAGCCGCT CAACGTTGCT GAAAGTAAAA TTCGCCGCAT TTCACTGACG
CAAACGAGGG CCGTATGA
|
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| Protein sequence | MLEVRELLCE RDERTLFSGL SFTLNAGEWV QITGSNGAGK TTLLRLLTGL SRPDAGEVLW
QGQPLHQVRD SYHQNLLWIG HQPGIKTRLT ALENLHFYHR DGDTAQCLEA LAQAGLAGFE
DIPVNQLSAG QQRRVALARL WLTRATLWIL DEPFTAIDVN GVDRLTQRMA QHTEQGGIVI
LTTHQPLNVA ESKIRRISLT QTRAV
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