| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3329 |
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| Symbol | |
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| ID | 6972434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3062680 |
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| End bp | 3065271 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643387141 |
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| Product | putative autotransporter, IS5K-containing |
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| Protein accession | YP_002271604 |
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| Protein GI | 209399094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.560533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAAT CTGGTTCTGT TTCTCTTTGT CGTTCCGCAA TATCTGTTCT GGTAGCTACA
GCGTTATATT CACCCATAGC ATTGGCATCA ACAGTTGAGT ATGGTGAGAC AGTTGATGGT
GTTGTCCTGG AAAAAGATAT CCAGCTGGTT TATGGGACCG CCAATAATAC GAAAATCAAT
CCTGGCGGAG AACAGCATAT TAAAGAATTT GGTATAAGTA GTAATACTGA AATTAACGGC
GGGTATCAGT ACATTGAAAT GAATGGCACC GCAGAATACT CAGTATTAAA TGATGGTTAT
CAAATTGTTC AAATGGGTGG CGCGGCAAAC CAGACTACGC TCAATAATGG TGTGCTACAG
GTTTATGGCG CAGCGAATGA TCCCACGATT AAAGGCGGGC GCTTAATCGT TGAAAAAGAT
GGGATTACCG TCCTTGCCGC TATCGAAAAG GGAGGATTAC TGGAGGTTAA AGAGGGGGGA
TTAGCGATTG CGGTAGATCA GAAAGCAGGC GGTGCTATTA AAGCAAGCAC GCGGGTCATG
GAGGTATTCG GAACAAACCG TCTCGGTCAG TTCGAAATCA AGAATGGTAT TGCTAACAAT
ATGCTGTTGG AAAACGGCGG AAGTTTGCGA GTTGAAGAAA ATGACTTCGC TTATAATACT
ACTGTAGATA GTGGCGGCTT ACTGGAGGTT ATGGATGGCG GGACTGCAAC TGGCGTTGAT
AAAAAAGCAG GCGGAAAATT AATTGTCTCA ACGAATGCGC TGGAAGTGAG TGGTACAAAC
AGTAAAGGCC AATTTAGTAT AAAAGATGGT GTGTCAAAAA ATTATGAACT GGATGATGGT
TCCGGGCTTA TTGTTATGGA GGACACGCAG GCCATTGACA CTATCCTCGA TGAGCATGCC
ACTATGCAAT CGCTGGGAAA GGATACTGGT ACGAGAGTGC AGGCAAATGC GGTATATGAT
CTCGGTCGAT CAGATCAGAA TGGAAGTATA ACGTATTCCT CTAAAGCCAT CTCTGAAAAT
ATGGTTATCA ACAATGGCCG CGCTAACGTC TGGGCTGGCA CAATGGTTAA CGTGTCAGTC
AGAGGAAATG ATGGCATTCT TGAGGTTATG AAGCCGCAAA TAAATTATGC ACCCGCAATG
TTGGTGGGTA AGGTAGTGGT TTCTGAGGGC GCTTCTTTAA GAACGCATGG TGCCGTGGAT
ACCAGCAAAG CGGATGTTTC GCTCGAAAAT AGCGCATGGA CCATCATTGC CGATATCACT
ACGACGAACC AAAACACCCG CCTTAACTTA GCCAACCTTG CGATGTCTGG CGCAAATGTG
ATTATGATGG ATGAGTCAGT GACTCGTTCA TCTGTGACGG CAAGTGCGGA AAATTTCACT
ACGTTGACCA CCAATACCCT GTCGGGAAAC GGCAATTTTT ATATGCGTAC CGATATGGCG
AATCATCAGA GCGATCAGCT CAACGTCACC GGTCAGGCAA CAGGTGATTT CAAAATATTC
GTGACGGACA CCGGTGCCAG CCCGGCAGCA GGAGATAGCC TTACACTGGT AACAACGGGC
GGCGGTGATG CTGCATTTAC GTTGGGCAAT GCCGGAGGCG TTGTTGATAT CGGTACGTAT
GAATATACCT TGCTGGATAA TGGTAACCAT AGCTGGAGTC TGGCAGAGAA TCGCGCGCAA
ATTACCCCTT CAACCACTGA TGTGCTGAAT ATGGCGGCCG CACAACCGCT GGTATTTGAT
GCAGAACTGG ACACCGTGCG TGAGCGTCTT GGTAGCGTAA AAGGCGTTAG TTACGATACG
GCGATGTGGA GTTCGGCAAT TAACACCCGC AACAACGTGA CCACTGATGC GGGAGCTGGT
TTTGAGCAAA CATTGACGGG CCTGACGCTC GGTATCGATA GCCGTTTCTC CCGTGAAGAA
AGCAGCACAA TTCGCGGCTT GTTCTTTGGT TACTCTCATT CTGATATTGG TTTTGATCGC
GGCGGCAAAG GCAATGTCGA TAGCTATACC CTGGGGGCTT ATGCCGGTTG GGAGCATCAG
AACGGTGCCT ATGTTGATGG AGTGGTGAAA GTTGACCGTT TTGCCAACAC CATCCATGGC
AAGATGAGTA ATGGGGCAAC AGCGTTTGGC GATTACAATA GTAACGGCGC GGGTGCTCAT
GTCGAGAGCG GGTTCCGTTG GGTTGACGGA TTGTGGAGTG TTAGACCCTA TCTGGCCTTT
ACCGGCTTTA CCACAGATGG TCAGGACTAC ACGTTATCAA ACGGCATGCG CGCGGATGTG
GGAAATACCC GGATATTACG CGCTGAAGCG GGAACGGCGG TAAGCTATCA CATGGACCTG
CAAAACGGTA CGACGCTGGA ACCCTGGCTG AAAGCCGCCG TGCGTCAGGA ATACGCCGAT
TCTAACCAGG TGAAAGTTAA TGACGATGGC AAATTTAATA ATGATGTGGC TGGAACCCGT
GGCGTTTATC AGGCTGGGAT AAGGTCATCG TTTACCCCGA CGTTAAGCGG TCATTTGTCA
GTCAGCTATG GCAATGGCGC AGGGGTAGAA TCGCCGTGGA ATACCCAGGC GGGTGTGGTC
TGGACGTTCT GA
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| Protein sequence | MHQSGSVSLC RSAISVLVAT ALYSPIALAS TVEYGETVDG VVLEKDIQLV YGTANNTKIN
PGGEQHIKEF GISSNTEING GYQYIEMNGT AEYSVLNDGY QIVQMGGAAN QTTLNNGVLQ
VYGAANDPTI KGGRLIVEKD GITVLAAIEK GGLLEVKEGG LAIAVDQKAG GAIKASTRVM
EVFGTNRLGQ FEIKNGIANN MLLENGGSLR VEENDFAYNT TVDSGGLLEV MDGGTATGVD
KKAGGKLIVS TNALEVSGTN SKGQFSIKDG VSKNYELDDG SGLIVMEDTQ AIDTILDEHA
TMQSLGKDTG TRVQANAVYD LGRSDQNGSI TYSSKAISEN MVINNGRANV WAGTMVNVSV
RGNDGILEVM KPQINYAPAM LVGKVVVSEG ASLRTHGAVD TSKADVSLEN SAWTIIADIT
TTNQNTRLNL ANLAMSGANV IMMDESVTRS SVTASAENFT TLTTNTLSGN GNFYMRTDMA
NHQSDQLNVT GQATGDFKIF VTDTGASPAA GDSLTLVTTG GGDAAFTLGN AGGVVDIGTY
EYTLLDNGNH SWSLAENRAQ ITPSTTDVLN MAAAQPLVFD AELDTVRERL GSVKGVSYDT
AMWSSAINTR NNVTTDAGAG FEQTLTGLTL GIDSRFSREE SSTIRGLFFG YSHSDIGFDR
GGKGNVDSYT LGAYAGWEHQ NGAYVDGVVK VDRFANTIHG KMSNGATAFG DYNSNGAGAH
VESGFRWVDG LWSVRPYLAF TGFTTDGQDY TLSNGMRADV GNTRILRAEA GTAVSYHMDL
QNGTTLEPWL KAAVRQEYAD SNQVKVNDDG KFNNDVAGTR GVYQAGIRSS FTPTLSGHLS
VSYGNGAGVE SPWNTQAGVV WTF
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