Gene ECH74115_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3296 
Symbol 
ID6971839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3028041 
End bp3029129 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content52% 
IMG OID643387108 
Producthypothetical protein 
Protein accessionYP_002271572 
Protein GI209400797 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.170772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.250376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACC GGGAAAAGGA GATCCTTGCA ATTTTACGGC GTAACCCGCT GATTCAGCAG 
AACGAAATTG CGGACATGCT GCAAATCAGC CGTTCGCGCG TTGCGGCGCA TATTATGGAT
TTAATGCGCA AAGGCCGGAT TAAAGGCAAA GGTTACATTC TCACCGAGCA GGAATACTGC
GTAGTGGTGG GGACAATCAA TATGGATATT CGCGGGATGG CGGATATCCG TTACCCGCAA
TCGGCTTCTC ATCCCGGTAC AATTCATTGC TCAGCGGGCG GCGTGGGACG CAACATCGCC
CACAATCTGG CGCTGTTAGG CCGTGACGTC CATTTGCTTT CAGTGATTGG CGATGACTTT
TATGGCGAAA TGCTCCTGGA AGAAACGCGC CGCGCCGGCG TGAATGTCTC CGGCTGCGTT
CGTTTACATG GTCAAAGCAC ATCGACGTAT CTGGCAATTG CCAATCGAGA CGATGAAACC
GTGCTGGCGA TTAACGATAC CCATCTGCTG GAACAGTTAT CGCCGCAATT ATTGAACGGG
TCGCGCGATT TACTTCGTCA TGCGGGCGTG GTACTGGCTG ATTGCAACCT GACAGCCGAG
GCGCTGGAAT GGGTCTTTAC CCTCGCTGGT GAGATCCCGG TGTTTGTCGA TACCGTTTCA
GAATTCAAAG CGGGCAAAAT CAAACACTGG CTGGCGCATA TTCACACCCT GAAACCCACT
TTACCGGAGC TGGAAATTTT ATGGGGACAG GCGATCACCA GCGATGCTGA CCGTAATGCT
GCAGTGAATG CGTTGCATCA GCAAGGTGTT CAGCAACTGT TTGTTTATTT GCCCGATGAG
TCAGTTTATT GCAGCGAAAA GGATGGAGAA CAATTTTTGC TGACCGCACC AGCGCATACG
ACAGTAGACA GTTTTGGTGC TGACGATGGT TTTATGGCGG GCCTGGTATA TAGCTTTCTG
GAAGGAAACA ATTTCCGTGA CAGCGCCCGT TTTGCGATGG CCTGCGCGGC AATTTCACGC
GCCAGCGGCA GCTTAAACAA CCCTACCCTG TCTGCCGATA ACGCGCTTTC ATTAGTGCCA
ATGGTGTAA
 
Protein sequence
MNNREKEILA ILRRNPLIQQ NEIADMLQIS RSRVAAHIMD LMRKGRIKGK GYILTEQEYC 
VVVGTINMDI RGMADIRYPQ SASHPGTIHC SAGGVGRNIA HNLALLGRDV HLLSVIGDDF
YGEMLLEETR RAGVNVSGCV RLHGQSTSTY LAIANRDDET VLAINDTHLL EQLSPQLLNG
SRDLLRHAGV VLADCNLTAE ALEWVFTLAG EIPVFVDTVS EFKAGKIKHW LAHIHTLKPT
LPELEILWGQ AITSDADRNA AVNALHQQGV QQLFVYLPDE SVYCSEKDGE QFLLTAPAHT
TVDSFGADDG FMAGLVYSFL EGNNFRDSAR FAMACAAISR ASGSLNNPTL SADNALSLVP
MV