Gene ECH74115_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3259 
Symboldld 
ID6969656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2992461 
End bp2994176 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content52% 
IMG OID643387072 
ProductD-lactate dehydrogenase 
Protein accessionYP_002271536 
Protein GI209400328 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00839206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTCCA TGACAACAAC TGATAATAAA GCCTTTTTGA ATGAACTTGC CCGTCTGGTC 
GGTCATTCAC ACCTGCTCAC CGATCCCGCA AAAACGGCCC GCTATCGCAA GGGCTTCCGT
TCTGGTCATG GCGACGCGCT GGCTGTCGTT TTCCCTGGCT CACTACTGGA ATTGTGGCGG
GTGCTGAAAG CCTGCGTCAC CGCCGACAAA ATTATTCTGA TGCAGGCTGC CAATACAGGC
CTGACCGAAG GATCGACGCC AAACGGTAAC GACTATGATC GCGATATCGT GATCATCAGC
ACCCTACGTC TCGACAAGCT GCACGTTCTC GGCAAGGGCG AACAGGTGCT GGCCTATCCG
GGCACCACGC TTTATTCCCT GGAAAAAGCC CTCAAACCGC TGGGACGCGA ACCGCACTCG
GTGATTGGTT CATCGTGCAT TGGCGCATCG GTTATCGGCG GTATCTGTAA TAACTCTGGT
GGTTCGCTGG TGCAGCGTGG CCCGGCGTAT ACCGAAATGT CGTTATTCGC GCGTATAAAT
GAAGATGGCA AACTGACGCT GGTGAACCAT CTGGGGATTG ATCTGGGCGA AACGCCGGAG
CAGATCCTTA GCAAGCTGGA TGACGATCGC ATCAAAGATG ACGATGTGCG TCACGATGGT
CGTCACGCCC ACGATTATGA CTATGTCCAC CGCGTTCGTG ATATTGAAGC CGACACGCCC
GCACGTTATA ACGCCGATCC GGATCGGTTA TTTGAATCTT CTGGTTGCGC CGGGAAGCTG
GCCGTCTTTG CAGTACGTCT TGATACCTTC GAAGCGGAAA AAAATCAGCA GGTGTTTTAT
ATCGGCACCA ACCAGCCGGA AGTGCTGACC GAAATCCGCC GTCATATTCT GGCTAACTTC
GAAAATCTGC CGGTTGCCGG GGAATATATG CACCGGGATA TCTACGATAT TGCGGAAAAA
TACGGCAAAG ACACCTTCCT GATGATTGAT AAGTTAGGCA CCGACAAGAT GCCGTTCTTC
TTTAATCTCA AGGGACGCAC CGATGCGATG CTGGAGAAAG TGAAATTCTT CCGTCCGCAT
TTTACTGACC GTGCGATGCA AAAATTCGGT CACCTGTTCC CCAGCCATTT ACCGCCGCGC
ATGAAAAACT GGCGCGATAA ATACGAGCAT CATCTGCTGT TAAAAATGGC GGGCGATGGC
GTGGGCGAAG CCAAATCGTG GCTGGTGGAT TATTTCAAAC AGGCCGAAGG CGATTTCTTT
GTCTGTACGC CGGAGGAAGG CAGCAAAGCG TTTTTACACC GTTTCGCCGC TGCGGGCGCA
GCAATTCGTT ATCAGGCGGT GCATTCCGAT GAAGTCGAAG ACATTCTGGC GCTGGATATC
GCTCTGCGGC GTAACGACAC CGAGTGGTAT GAGCATTTAC CGCCGGAGAT CGACAGCCAG
CTGGTGCACA AGCTCTATTA CGGCCATTTT ATGTGCTATG TCTTCCATCA GGATTACATC
GTTAAAAAAG GCGTGGATGT GCATGCGTTG AAAGAACAGA TGCTGGAGCT GCTACAGCAG
CGCGGCGCGC AATACCCTGC CGAACATAAC GTCGGTCATT TGTATAAAGC ACCGGAGACA
TTGCAGAAGT TTTATCGCGA GAACGATCCG ACCAACAGTA TGAATCCGGG GATCGGTAAA
ACCAGTAAGC GGAAAAACTG GCAGGAAGTG GAGTAA
 
Protein sequence
MSSMTTTDNK AFLNELARLV GHSHLLTDPA KTARYRKGFR SGHGDALAVV FPGSLLELWR 
VLKACVTADK IILMQAANTG LTEGSTPNGN DYDRDIVIIS TLRLDKLHVL GKGEQVLAYP
GTTLYSLEKA LKPLGREPHS VIGSSCIGAS VIGGICNNSG GSLVQRGPAY TEMSLFARIN
EDGKLTLVNH LGIDLGETPE QILSKLDDDR IKDDDVRHDG RHAHDYDYVH RVRDIEADTP
ARYNADPDRL FESSGCAGKL AVFAVRLDTF EAEKNQQVFY IGTNQPEVLT EIRRHILANF
ENLPVAGEYM HRDIYDIAEK YGKDTFLMID KLGTDKMPFF FNLKGRTDAM LEKVKFFRPH
FTDRAMQKFG HLFPSHLPPR MKNWRDKYEH HLLLKMAGDG VGEAKSWLVD YFKQAEGDFF
VCTPEEGSKA FLHRFAAAGA AIRYQAVHSD EVEDILALDI ALRRNDTEWY EHLPPEIDSQ
LVHKLYYGHF MCYVFHQDYI VKKGVDVHAL KEQMLELLQQ RGAQYPAEHN VGHLYKAPET
LQKFYRENDP TNSMNPGIGK TSKRKNWQEV E