| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3256 |
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| Symbol | |
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| ID | 6968401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2988799 |
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| End bp | 2989716 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643387069 |
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| Product | ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein |
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| Protein accession | YP_002271533 |
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| Protein GI | 209399202 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.00281885 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACTCT CAAAGGTCTG GGCAGGTTCA CTGGTTTTGT TGGCAGCCGT GAGCCTGCCG
CTGCACGCGG CTTCCCCCGT TAAAGTCGGT TCAAAAATCG ATACCGAAGG CGCGCTGCTC
GGCAATATCA TTTTGCAAGT ACTCGAAAGC CACGGAGTAC CAACGGTCAA TAAAGTGCAA
CTTGGAACGA CTCCTGTGGT GCGCGGGGCG ATTACTTCCG GTGAACTGGA TATCTATCCG
GAATATACCG GCAATGGCGC GTTTTTCTTT AAAGATGAAA ACGATGCAGC GTGGAAAAAC
GCGCAGCAAG GTTACGAGAA AGTCAAAAAA CTCGATGCAG AGCAAAACAA GTTAATCTGG
CTGACGCCCG CACCTGCAAA TAACACCTGG ACCATCGCCG TGCGTCAGGA TGTGGCAGAG
AAAAACAAAC TCACTTCGCT TGCTGACCTG AGGCGTTATC TGAAAGAGGG CGGCACCTTC
AAACTGGCAG CCTCGGCTGA GTTTATCGAA CGCGCCGATG CGTTACCCGC GTTTGAAAAA
GCCTACGACT TTAAACTCGA TCAGGATCAG TTACTGTCAC TGGCTGGCGG CGACACGGCG
GTAACGATTA AAGCCGCTGC CCAGCAAACT TCTGGCGTTA ATGCCGCAAT GGCTTACGGC
ACTGACGGTC CGGTCGCGGC GCAGGGGCTG CAAACCTTAA GCGATCCGCA AGGCGTGCAA
CCTATCTACG CGCCTGCACC AGTGGTGCGT GAGTCGGTGC TGAAAGAGTA TCCGCAAATG
GCACAGTGGC TACAGCCAGT CTTCGCCAGC CTCGATGCAA AAACATTGCA GCAACTGAAT
GCCAGCATTG CAGTGGAAGG ACTGGATGCC AAAAAAGTGG CTGCCGACTA CTTGAAACAA
AAAGGGTGGA CGAAGTAA
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| Protein sequence | MPLSKVWAGS LVLLAAVSLP LHAASPVKVG SKIDTEGALL GNIILQVLES HGVPTVNKVQ
LGTTPVVRGA ITSGELDIYP EYTGNGAFFF KDENDAAWKN AQQGYEKVKK LDAEQNKLIW
LTPAPANNTW TIAVRQDVAE KNKLTSLADL RRYLKEGGTF KLAASAEFIE RADALPAFEK
AYDFKLDQDQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAAQGL QTLSDPQGVQ
PIYAPAPVVR ESVLKEYPQM AQWLQPVFAS LDAKTLQQLN ASIAVEGLDA KKVAADYLKQ
KGWTK
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