| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3237 |
|---|
| Symbol | |
|---|
| ID | 6967633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2975285 |
|---|
| End bp | 2975899 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643387053 |
|---|
| Product | putative repressor protein |
|---|
| Protein accession | YP_002271517 |
|---|
| Protein GI | 209395751 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.150382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.000476613 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGTCGGGG TTAGCCAAGC TGCTATTCAG AAAATCGAAA CAGGGAAAGC TAATCAAACA
ACTAAAATCG TGGAGATCGC GAACGCTTTG GGTGTGCGCG CAGAATGGTT ATCTTCTGGC
GTTGGAAATA TGTCAGACAG TACAGTGCAA CCAATACAAC CAACTGTCAG CCATTCCAAA
TACTTTAAGA TTGACGTTCT TGATATAGAA GTGAGTGCCG GGCCGGGTGT CATCAACCGT
GAGTTTGTAG AAGTCCTACG CTCGGTTGAG TACTCGTTTG ACGATGCTCG TCACATGTTC
GATGGCAGGA AGGCAGAAAA TATCCGCATC ATTAACGTAC GCGGTGACAG CATGTCAGGA
ACGATTGAAC CTGGTGATCT GCTGTTCGTT GATATCACGG TTAAATCTTT CGACGGTGAT
GGTATCTATG CGTTTCTGTA CGACGACACA GCCCATGTAA AGCGCCTGCA AATGATGAAG
GATAAACTGC TGGTTATCTC TGATAACAAG AGCTACTCAC CGTGGGACCC AATCGAGAAA
GACGAGATGA ACCGGGTGTT TATCTTCGGG AAAGTTATTG GGAGCATGCC GCAGACGTAT
AGGAAGCATG GATAG
|
|---|
| Protein sequence | MVGVSQAAIQ KIETGKANQT TKIVEIANAL GVRAEWLSSG VGNMSDSTVQ PIQPTVSHSK
YFKIDVLDIE VSAGPGVINR EFVEVLRSVE YSFDDARHMF DGRKAENIRI INVRGDSMSG
TIEPGDLLFV DITVKSFDGD GIYAFLYDDT AHVKRLQMMK DKLLVISDNK SYSPWDPIEK
DEMNRVFIFG KVIGSMPQTY RKHG
|
|---|
| |