| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3202 |
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| Symbol | clpP |
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| ID | 6971002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2952162 |
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| End bp | 2954117 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387021 |
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| Product | Clp protease domain protein |
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| Protein accession | YP_002271488 |
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| Protein GI | 209400945 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.790281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00227439 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGCTG GGGGGCCGGG TGACGCGGAT ATTTATATTT ATGACGAGAT TGGTTTCTGG
GGAGTTACCG CGAAGCAGTT TGTCAGCGAA CTGAATGCAC TGGGTGATAT CACCCACATT
AATCTCCATA TCAATTCACC GGGTGGCGAT GTCTTTGAAG GCATCGCCAT TTTTAATGCC
CTGAAAAATC AGGGGGCGAC CATTACCGTG TATGTGGATG GCGTTGCCGC CTCGATGGCA
TCTGTGATTG CGATGGCCGG TGATACGGTC ATTATGCCGG AAAATGCCTT CATGATGATC
CATAAGCCAT GGGGATTCAG TGGCGGGGAT GCTGAGGATA TGCGCAGTTA TGCCGATTTG
CTGGATAAAG TCGAATCGGT ACTGTTGCCA GCCTATGCGC AGAAAACCGG AAAAACCACC
GATGAAATTG CCGCCATGCT GGCGGATGAA ACCTGGATGT CCGGTGCCGA ATGTCTGGCA
CACGGATTTG CTGACCAGGT GACACCCGCT GTTGAGGCAA TGGCATGTAT TCAGTCAAAA
CGTACAGAGG AATTTAAAAA GATGCCGGAA TCCATCCGAA ACATGATTAC TCCGCCACGC
AACAGTGCCC CGCGTGATAC CACAGTGACA ATCCCTGCAC CGGCGGTAAC AGAACCATCA
CCGGTACCGG CAGTGTCTGA TGAGGCGACC ATTCGCGCCC GCGTTATGGC AGAACAGAAA
GCCCGCATGT CAGGCATTAA CGATCTGTTT GCCATGTTCG GTGGTCGCTA TCAGACGCTT
CAGGCACAGT GCGTGGCTGA TCCTGACTGT TCGCTGGAAA TGGCCCGTGA ACGACTGCTG
AATGAAATGG GCAAGGAGTC CTCGCCGACC AACAAAAATA CACCGGCCCA TATTTATGCC
GGAAACGGCA ATTTTGTGGG GGACGGGATC CGCCAGGCGA TGCTGGCCCG TGCCGGATTT
GAAAATGTCG AGAAGGATAA CGCCTATAAC GGGATGACCC TGCGTGAATG GGCTCGCATG
TCACTGACGG AGCGCGGTAT TGGGGTGGCC AGTTATAACC CCATGCAGAT GGTCGGGCTG
GCGCTGACGC ACAGCACCTC TGATTTTGGC AATATTCTGC TGGATGTGTC GAACAAGGGG
CTGATCCAGG GCTGGGAGGA ATCAGAAGAA ACCTTCCAGA AGTGGACCCG TAAGGGACGC
CTGTCAGACT TCAAAACAGC GTATCGCGTG GGGATGGGCG GTTTTGGTTC TCTGCGCCAG
GTTCGTGAGG GGGCGGAGTA TAAATACATC ACCACCTCAG ATCGCAAGGA GACCATTGCA
CTGGCCACTT ACGGGGAGAT TTTCTCCATC ACCCGCCAGG CCATTATCAA TGATGATCTG
AATATGCTGG TGGACGTGCC GATGAAGATG GGGCGTGCGG CGAAGGCAAC GATTGGTGAC
CTGGTCTACA AGGTGCTGAC GGATAACCCG AAACTGTCCG ACGGTAAGGC GCTGTTCCAT
GCCGATCACA AAAATATTGC CACCGGGGGG ATCTCCGTTT CCGGACTGGA TGCGGCCCGT
CAGATGATGC GCCTGCAGAA AGAAGGCGAT CGTGCCCTGA ATATCCGTCC GGCCTTTATG
CTGGTACCGG TGGCACTGGA GACGGTGGCG AACCAGACCA TCAAATCGGC CAGTGTGAAA
GGGGCGGATG CAAACGCCGG TGTCATTAAC CCTATCCAGA ACTTTGCTGA GGTGATTGCA
GAAGCGCGTC TTGATGCGGC AGACCCGAAA ACCTGGTATC TGGCGGCGGC ACAGGGCACT
GACACCATTG AAGTGGCCTG GCTGGATGGT GTGGACACGC CATACATTGA TCAGCAGGAA
GGTTTCACCA CTGACGGCAT TGCCACAAAA ATCCGTATTG ATGCCGGAGT GGCACCACTT
GACTGGCGCG GGCTGGTGCG TTCGTCGGTG GCCTGA
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| Protein sequence | MQAGGPGDAD IYIYDEIGFW GVTAKQFVSE LNALGDITHI NLHINSPGGD VFEGIAIFNA
LKNQGATITV YVDGVAASMA SVIAMAGDTV IMPENAFMMI HKPWGFSGGD AEDMRSYADL
LDKVESVLLP AYAQKTGKTT DEIAAMLADE TWMSGAECLA HGFADQVTPA VEAMACIQSK
RTEEFKKMPE SIRNMITPPR NSAPRDTTVT IPAPAVTEPS PVPAVSDEAT IRARVMAEQK
ARMSGINDLF AMFGGRYQTL QAQCVADPDC SLEMARERLL NEMGKESSPT NKNTPAHIYA
GNGNFVGDGI RQAMLARAGF ENVEKDNAYN GMTLREWARM SLTERGIGVA SYNPMQMVGL
ALTHSTSDFG NILLDVSNKG LIQGWEESEE TFQKWTRKGR LSDFKTAYRV GMGGFGSLRQ
VREGAEYKYI TTSDRKETIA LATYGEIFSI TRQAIINDDL NMLVDVPMKM GRAAKATIGD
LVYKVLTDNP KLSDGKALFH ADHKNIATGG ISVSGLDAAR QMMRLQKEGD RALNIRPAFM
LVPVALETVA NQTIKSASVK GADANAGVIN PIQNFAEVIA EARLDAADPK TWYLAAAQGT
DTIEVAWLDG VDTPYIDQQE GFTTDGIATK IRIDAGVAPL DWRGLVRSSV A
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