Gene ECH74115_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3143 
Symbol 
ID6970454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2914785 
End bp2915318 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID643386966 
Productlysozyme 
Protein accessionYP_002271434 
Protein GI209397513 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.60318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000000619176 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGGA AACTCCGCTA TGGTTTATCG GCTGCCGTTC TGGCGCTGAT TGCCGCAGGT 
GCTTCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACA
GCATACCGTG ATGGTGCGGG TATCTGGACC ATCTGCCGTG GAGCCACCCG GGTGGATGGT
AAGCCTGTTA TTCCTGGCAT GAAGCTGTCG AAGGAAAAAT GCGACCGGGT TAACGCCATT
GAGCGTGATA AGGCGCTGGC ATGGGTGGAG AAAAACATTA AAGTGCCGCT GACCGAACCC
CAGAAAGCGG GGATCGCGTC ATTCTGTCCG TACAACATTG GTCCCGGTAA GTGTTTCCCG
TCGACGTTTT ACAGACGAAT TAATGCAGGT GATCGAAAAG GTGCCTGCGA AGCTATTCGC
TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATTCGTT CAAACAACTG TTACGGTCAG
GTATCCCGTC GTGACCAGGA GAGCGCGCTG GCGTGCTGGG GAATCGACAG ATAA
 
Protein sequence
MSRKLRYGLS AAVLALIAAG ASAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGATRVDG 
KPVIPGMKLS KEKCDRVNAI ERDKALAWVE KNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYRRINAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWGIDR