Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3143 |
Symbol | |
ID | 6970454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2914785 |
End bp | 2915318 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643386966 |
Product | lysozyme |
Protein accession | YP_002271434 |
Protein GI | 209397513 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.60318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000000619176 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGGA AACTCCGCTA TGGTTTATCG GCTGCCGTTC TGGCGCTGAT TGCCGCAGGT GCTTCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACA GCATACCGTG ATGGTGCGGG TATCTGGACC ATCTGCCGTG GAGCCACCCG GGTGGATGGT AAGCCTGTTA TTCCTGGCAT GAAGCTGTCG AAGGAAAAAT GCGACCGGGT TAACGCCATT GAGCGTGATA AGGCGCTGGC ATGGGTGGAG AAAAACATTA AAGTGCCGCT GACCGAACCC CAGAAAGCGG GGATCGCGTC ATTCTGTCCG TACAACATTG GTCCCGGTAA GTGTTTCCCG TCGACGTTTT ACAGACGAAT TAATGCAGGT GATCGAAAAG GTGCCTGCGA AGCTATTCGC TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATTCGTT CAAACAACTG TTACGGTCAG GTATCCCGTC GTGACCAGGA GAGCGCGCTG GCGTGCTGGG GAATCGACAG ATAA
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Protein sequence | MSRKLRYGLS AAVLALIAAG ASAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGATRVDG KPVIPGMKLS KEKCDRVNAI ERDKALAWVE KNIKVPLTEP QKAGIASFCP YNIGPGKCFP STFYRRINAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWGIDR
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