Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3136 |
Symbol | |
ID | 6967723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2910272 |
End bp | 2912395 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643386961 |
Product | phage terminase large subunit |
Protein accession | YP_002271429 |
Protein GI | 209396075 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00000155862 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAATCAGG TGAACGAGAG CCATAGCCGC GCATCCGATA TCTGGCGCGA AGTGGCCTCG CTGTTTCGCC CACCCAGCCG GTTACCAGTA GCGGAAGCCA TCAGGCGTTA TATGCGGGTT CCACGGGGAG CCAATACTTC CGGTCCGTGG GAGTCATCGC TGACGCCCTA TATGATTGAC CCCATTAATA CATTATCAGC CCGTGAATAT GACGCGGTGG TGTTTGTGGG ACCTGCGCGA ACCGGGAAAA CCGAAGGGCT GATTGATGGC TGGATTGTGT ACGGCATCAT CTGTGATCCG GCGGATATGC TGGTGGTGCA GATGACTGAG ACGAAGGCGC GTGAGCATTC CAGAACGCGT CTTTCCAGGA CGTTTCGCCA CAGTCCGGAG GTCAGCAAGC GCCTCAGTCC TTCCCGTAAT GACAACAACG TCCACGATAA AATGTTTCTT GACGGCTCCT TCCTGAAGAT TGGCTGGCCG TCGATCACCG TCTTTTCCTC TTCGGATTAC CGTCGTGTGG CGCTGACGGA TTATGACCGT TTCCCTGAAA ATGTGGACGG GGAAGGGGAT GCCTTCACGC TGGCCTCAAA GCGTACCACC ACCTTTATGT CCTCGGGGAT GACCCTGGTC GAGAGTTCAC CGGGGCGGGA TATCACCGAT ACCAAATGGC GTTGTGGTGG CGCACATGAG GCACCGCCAA CAACGGGGAT CCTGTCACTG TATAACCGGG GAGACCGCCG CCGGTGGTAC TGGCCGTGTC CGCACTGCGG GGAATATTTT CAGCCGGTGA TGGATAACAT GACCGGATAC CGGAATAACC CGGATTTTGT GGCTGCCGGT CAGGCTGCCC GTCTGATGTG TCCGCATTGT CGCGGGCTGA TTGCCCCTGA GCAGAAACGC GAACTGAATA ACCAGGGGAT CTGGCTTCGT GAAGGTGAAC GGGCGGCGGC GGACGGCAGT ATCACCGGAA CGCCACGAAA CTCCCGGATT GCGTCATTTT GGATGGAGGG GCCAGCTGCG GCGTTTCAGA CCTGGGAACA ACTGATTTTT AAACTGCTGG CGGCAGAAGA AGAGTATGAG CGAACCGGCA GTGAAGAGAC CCTGAAAGCG GTGGTGAACA CCGATATCGG ACGACCCTAT CTGCCCCGTT CAGCCACGGA ACAGCGTAAA AGTGAACTGC TTGAACAGCG TGCCGAGCCG TTTCCCCGGC GATCTGTGCC GGATGGTGTG CGTTTTATTG AGGCAACGGT TGACGTACAG GGCGGTAAAA ATCGCCGTTT TGTTGTGCAG ATCACCGGAT ACGGAGAGCA GGGGGAACGC TGGATTGTTG ATCGCTACAA CATCCGGCAT TCACTGCGCT GCAGTCCCAA CGGTGAAAGT CTGCCGGTTG ATCCGGCGGC ATATCCGGAG GACTGGGATT TGTTGCTGAC GGATGTGTTC CATAAAACAT GGCCGCTGGC TTCTGATCCG GATGTGCGCA TGCGTCTGAT GGCCATGGCG GTGGATACGG GAGGGGAAGC CGGGGTGACA GATAACGCCT ATCGTTTCTG GCGTCGTTGC CGGAGTGACG GACTGGGCAA CAGGGTGTTT CTGTTCAAGG GGGATGGACT TCGCCGTGAC AGGCTGATTA ACCGAACCTT CCCGGATAAT ACCGGCAGAA GTGCCCGCCG TGCCAGAGCC AGTGGCGATG TCGCGCTGTG GCTGGTTCAG ACGGATGCGT TTAAGGATCG TGTAAATAAT GCCCTGTGGC GTGACACACC AGGGCCGAAC TATATCCACT TTCCCGACTG GCTGGGGCGG TGGTTTTACG ATGAGCTGAC CTATGAAGAG CGCGGCAGTG ACGGAAAATG GCGAAAACCG GGCAGGGGCG CTAACGAAGC GTTTGACCTG CTGGTTTATG CGGATGCGCT TGCCGTTCTG CATGGTTACG AAAAGATCCG CTGGCCCTCC GCACCGGACT GGGCACAGCG GGAAACGTGG CTCGTCTTCC CGCAGGAGCG TTCTGGTGAA ACGGTATCCC CGGAACTGAC GGCCGGGGCA GAAAAACGCC GTCGCCGGAA GAAAAAACTG CGGACGGAGC GTGCGGAAGA TAATCCATGG ATAACATCAG GAGGCTGGTT GTGA
|
Protein sequence | MNQVNESHSR ASDIWREVAS LFRPPSRLPV AEAIRRYMRV PRGANTSGPW ESSLTPYMID PINTLSAREY DAVVFVGPAR TGKTEGLIDG WIVYGIICDP ADMLVVQMTE TKAREHSRTR LSRTFRHSPE VSKRLSPSRN DNNVHDKMFL DGSFLKIGWP SITVFSSSDY RRVALTDYDR FPENVDGEGD AFTLASKRTT TFMSSGMTLV ESSPGRDITD TKWRCGGAHE APPTTGILSL YNRGDRRRWY WPCPHCGEYF QPVMDNMTGY RNNPDFVAAG QAARLMCPHC RGLIAPEQKR ELNNQGIWLR EGERAAADGS ITGTPRNSRI ASFWMEGPAA AFQTWEQLIF KLLAAEEEYE RTGSEETLKA VVNTDIGRPY LPRSATEQRK SELLEQRAEP FPRRSVPDGV RFIEATVDVQ GGKNRRFVVQ ITGYGEQGER WIVDRYNIRH SLRCSPNGES LPVDPAAYPE DWDLLLTDVF HKTWPLASDP DVRMRLMAMA VDTGGEAGVT DNAYRFWRRC RSDGLGNRVF LFKGDGLRRD RLINRTFPDN TGRSARRARA SGDVALWLVQ TDAFKDRVNN ALWRDTPGPN YIHFPDWLGR WFYDELTYEE RGSDGKWRKP GRGANEAFDL LVYADALAVL HGYEKIRWPS APDWAQRETW LVFPQERSGE TVSPELTAGA EKRRRRKKKL RTERAEDNPW ITSGGWL
|
| |