Gene ECH74115_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3129 
Symbol 
ID6971528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2904108 
End bp2904860 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID643386954 
Productmajor tail protein V 
Protein accessionYP_002271422 
Protein GI209400386 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00117115 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACAC CAAATCCCCT TGAGCCGGTA AAAGGTGCCG GTACCACTCT GTGGGTTTAC 
AACGGCAAGG GTGATGCTTA TGCAAACCCG TTGTCAGACG ATGACTGGCA GCGACTGGCT
AAGGTGAAGG ATCTGACGCC GGGCGAGATG ACGGCAGAAC CCTACGATGA TAACTACCTG
GATGATGAAG ACGCGGACTG GACCGCGACC GGGCAGGGGC AGAAGTCTGC AGGAGATACC
AGTTTTACGC TGGCCTGGAA ACCGGGAGAA GAAGGTCAGA AAGGGCTTAT AGGCTGGTTT
GAAAGCGGGG ATGTGCGGGC CTATAAAATC CGTTTCCCAA ATGGCACGGT GGATGTGTTC
CGTGGCTGGG TCAGCAGTAT CGGTAAGGCC GTGACGGCGA AAGAAGTGAT CACCCGCACG
GTGAAAGTCA CTAACGTGGG CAAACCTTCC GTGGCGGAAG AACGCAGCGA AATTACGCCG
GCCACTGCAA TTAAGGTGAC ACCGACATCC GGTACGGTGG CAAAAGGGAA AACAACCACC
CTGACGGTTT CTTTTGAGCC GGAAAGTGCA ACCGACAAGA CGTTCAGAGC GGTTTCCGCC
GATCCGTCGA AAGCCACCAT TAGTGTGAAA GATATGACAA TTACGGTAAA CGGCGTGGCG
ACAGGTAAGG TGCAGATCCC TGTGGTGAGC GGAAATGGTC AGTTCGCCGC AGTGGCTGAA
GTCACCGTTA CTGAAGCGGG CGCTGCAGGG TAA
 
Protein sequence
MATPNPLEPV KGAGTTLWVY NGKGDAYANP LSDDDWQRLA KVKDLTPGEM TAEPYDDNYL 
DDEDADWTAT GQGQKSAGDT SFTLAWKPGE EGQKGLIGWF ESGDVRAYKI RFPNGTVDVF
RGWVSSIGKA VTAKEVITRT VKVTNVGKPS VAEERSEITP ATAIKVTPTS GTVAKGKTTT
LTVSFEPESA TDKTFRAVSA DPSKATISVK DMTITVNGVA TGKVQIPVVS GNGQFAAVAE
VTVTEAGAAG