Gene ECH74115_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3118 
Symbol 
ID6966927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2892536 
End bp2893849 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID643386944 
Producttail fiber protein 
Protein accessionYP_002271412 
Protein GI209395988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.145222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAA AGATTTCAGG TGTACTGAAA GACGGCACAG GAAAACCGGT AGAGAACTGC 
ACCATTCAAC TGAAAGCCAG ACGTAACAGC GCCACGGTGG TGGTGAACAC GGTGGCCTCT
GAAAATCCGG ATGAAGCCGG TCGTTACAGC ATGGACGTTG AGTACGGTCA GTACAGCGTC
ATTCTGTTGG TGGAGGGCTT CCCGCCGTCA CATGCCGGGA CCATCACCGT GTATGAAGAT
TCTCAACCGG GGACGCTGAA TGATTTTCTC GGTGCCATGT CGGAGGATGA CGTCCGGCCG
GAGGCACTGC GTCGTTTTGA ACTGATGGTG GAAGAAGCGG CGCGTCACGC TGAGGAGGCG
AAGAAGAATG CCGGAGAGGC GGAGACATCA GCGAGGAATG CCGGCATATC ATCCAGTAAG
GCGGAAGCGA GCGCGGCAAA TGCTGACACT TCAGCAGGGG ATGCATTGGA GTCAGCCCGG
CAGGCGGCAG AAAGTGCAGC CGCTGCAAAG CAGTCAGAGG ATGCGTCCTC GTCCTCGGCT
TCTGCGGCCG CTCAAAAAGC CAGTGAGTCA TCACAAAGTG CAGCAGAAGC TGAATTGTCA
AGAAAGACGG CAGAAAGTGC AGCCGGTAAT GCAGCCAGGG ATGCAACGAC CGCAACAGAA
AAAGCCCGGG AGTCAGCAGA AAGCGCACAG TCAGCGGAAC AAAGCAGGAT AGCGGCGGAA
GAGGCCGTAA ACCGAATCCC CACCGTGGTG GGACCTCCCG GGCCAAAGGG GGAACAGGGG
CCCGCGGGTC CTCAGGGGCC GAAGGGTGAT AAGGGAGAGC GCGGTGACAC CGGCCCTGTC
GGGGCAACCG GCGAACGGGG ACCGGCAGGT GATGCTGGTC CGGCAGGCCC GCAGGGGCCG
AAAGGTGACA GGGGAGAGCG GGGAGAGACC GGTCTGACGG GAAATGCAGG TCCACAGGGT
CCAAAGGGAG ATACCGGTGC GGCAGGCCCG GCAGGCCCAC AGGGACCGAA AGGAGAAACA
GGTGCGGCTG GCCCGGTGGG GGCAACCGGA CCTCAGGGAC CGAAGGGCGA CCCGGGGGAG
GCACAAATCC GTTTTCGTCT GGGGCCGGCG AGCATTATTG AGACAAACAG CAATGGCTGG
TTCCCGGATA CAGATGGCGC ACTCATCACC GGACTGACCT TTCTTGACCC CAAAGATGCC
ACACAGGTTC AGGGGCTGTT TCGGCATTTG CAGGTCAGGT TTGGTGACGG GCCGTGGCAG
GATGTTAAGG GGCTGGATGA AGTGGGCAGT GATACAGGCA GAACAGGAGA ATGA
 
Protein sequence
MAVKISGVLK DGTGKPVENC TIQLKARRNS ATVVVNTVAS ENPDEAGRYS MDVEYGQYSV 
ILLVEGFPPS HAGTITVYED SQPGTLNDFL GAMSEDDVRP EALRRFELMV EEAARHAEEA
KKNAGEAETS ARNAGISSSK AEASAANADT SAGDALESAR QAAESAAAAK QSEDASSSSA
SAAAQKASES SQSAAEAELS RKTAESAAGN AARDATTATE KARESAESAQ SAEQSRIAAE
EAVNRIPTVV GPPGPKGEQG PAGPQGPKGD KGERGDTGPV GATGERGPAG DAGPAGPQGP
KGDRGERGET GLTGNAGPQG PKGDTGAAGP AGPQGPKGET GAAGPVGATG PQGPKGDPGE
AQIRFRLGPA SIIETNSNGW FPDTDGALIT GLTFLDPKDA TQVQGLFRHL QVRFGDGPWQ
DVKGLDEVGS DTGRTGE