Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3118 |
Symbol | |
ID | 6966927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2892536 |
End bp | 2893849 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643386944 |
Product | tail fiber protein |
Protein accession | YP_002271412 |
Protein GI | 209395988 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.145222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA AGATTTCAGG TGTACTGAAA GACGGCACAG GAAAACCGGT AGAGAACTGC ACCATTCAAC TGAAAGCCAG ACGTAACAGC GCCACGGTGG TGGTGAACAC GGTGGCCTCT GAAAATCCGG ATGAAGCCGG TCGTTACAGC ATGGACGTTG AGTACGGTCA GTACAGCGTC ATTCTGTTGG TGGAGGGCTT CCCGCCGTCA CATGCCGGGA CCATCACCGT GTATGAAGAT TCTCAACCGG GGACGCTGAA TGATTTTCTC GGTGCCATGT CGGAGGATGA CGTCCGGCCG GAGGCACTGC GTCGTTTTGA ACTGATGGTG GAAGAAGCGG CGCGTCACGC TGAGGAGGCG AAGAAGAATG CCGGAGAGGC GGAGACATCA GCGAGGAATG CCGGCATATC ATCCAGTAAG GCGGAAGCGA GCGCGGCAAA TGCTGACACT TCAGCAGGGG ATGCATTGGA GTCAGCCCGG CAGGCGGCAG AAAGTGCAGC CGCTGCAAAG CAGTCAGAGG ATGCGTCCTC GTCCTCGGCT TCTGCGGCCG CTCAAAAAGC CAGTGAGTCA TCACAAAGTG CAGCAGAAGC TGAATTGTCA AGAAAGACGG CAGAAAGTGC AGCCGGTAAT GCAGCCAGGG ATGCAACGAC CGCAACAGAA AAAGCCCGGG AGTCAGCAGA AAGCGCACAG TCAGCGGAAC AAAGCAGGAT AGCGGCGGAA GAGGCCGTAA ACCGAATCCC CACCGTGGTG GGACCTCCCG GGCCAAAGGG GGAACAGGGG CCCGCGGGTC CTCAGGGGCC GAAGGGTGAT AAGGGAGAGC GCGGTGACAC CGGCCCTGTC GGGGCAACCG GCGAACGGGG ACCGGCAGGT GATGCTGGTC CGGCAGGCCC GCAGGGGCCG AAAGGTGACA GGGGAGAGCG GGGAGAGACC GGTCTGACGG GAAATGCAGG TCCACAGGGT CCAAAGGGAG ATACCGGTGC GGCAGGCCCG GCAGGCCCAC AGGGACCGAA AGGAGAAACA GGTGCGGCTG GCCCGGTGGG GGCAACCGGA CCTCAGGGAC CGAAGGGCGA CCCGGGGGAG GCACAAATCC GTTTTCGTCT GGGGCCGGCG AGCATTATTG AGACAAACAG CAATGGCTGG TTCCCGGATA CAGATGGCGC ACTCATCACC GGACTGACCT TTCTTGACCC CAAAGATGCC ACACAGGTTC AGGGGCTGTT TCGGCATTTG CAGGTCAGGT TTGGTGACGG GCCGTGGCAG GATGTTAAGG GGCTGGATGA AGTGGGCAGT GATACAGGCA GAACAGGAGA ATGA
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Protein sequence | MAVKISGVLK DGTGKPVENC TIQLKARRNS ATVVVNTVAS ENPDEAGRYS MDVEYGQYSV ILLVEGFPPS HAGTITVYED SQPGTLNDFL GAMSEDDVRP EALRRFELMV EEAARHAEEA KKNAGEAETS ARNAGISSSK AEASAANADT SAGDALESAR QAAESAAAAK QSEDASSSSA SAAAQKASES SQSAAEAELS RKTAESAAGN AARDATTATE KARESAESAQ SAEQSRIAAE EAVNRIPTVV GPPGPKGEQG PAGPQGPKGD KGERGDTGPV GATGERGPAG DAGPAGPQGP KGDRGERGET GLTGNAGPQG PKGDTGAAGP AGPQGPKGET GAAGPVGATG PQGPKGDPGE AQIRFRLGPA SIIETNSNGW FPDTDGALIT GLTFLDPKDA TQVQGLFRHL QVRFGDGPWQ DVKGLDEVGS DTGRTGE
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