Gene ECH74115_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3094 
Symbol 
ID6971016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2864223 
End bp2864765 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID643386925 
Productfimbrial protein 
Protein accessionYP_002271393 
Protein GI209397648 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.989745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT CAATTATTGC TGTCGCTGTC TTATCTTCTG TATTTATGAG TGCTGGTATT 
TTCGCTGCTG AAGTAGATAC CGGAACTTTA ACCATTAAAG GTAATATTGC AGAATCACCA
TGTACATTTG TCGCTGGCGG TGATTCAGTC AGTATTAATA TGCCGACTGT ACCCACCACT
GTATTTGATG GTAAAGCGAA ATATTCAACT TATGATGGCG CGGTTGGTGT AACCAGCAGT
ATGCTGAAAA TTACTTGTCC GAAGACTATT GATGGCGTAA AACTTTCGTT GATCACCAAC
GAGAAAATTC TTGGTAATGA TAAGGCAATA TCCAGTAGTA ATGACACAGT TGGATACTAT
CTCTATTTGG GAGATAGCAG TGACGTACTG GATATTTCCG CACCATTTAA TATTGAAAGT
TATAAAACTG CTGATGGACA ATATGCAATA CCGTTTAAGG CAAAATATCT GAAGTTGACT
GACAGTGGTG TTGCATCTGG TACAGTTAAC TCTTCATTGG TTATGCGTGT TGCCCAGGAT
TAA
 
Protein sequence
MKHSIIAVAV LSSVFMSAGI FAAEVDTGTL TIKGNIAESP CTFVAGGDSV SINMPTVPTT 
VFDGKAKYST YDGAVGVTSS MLKITCPKTI DGVKLSLITN EKILGNDKAI SSSNDTVGYY
LYLGDSSDVL DISAPFNIES YKTADGQYAI PFKAKYLKLT DSGVASGTVN SSLVMRVAQD