Gene ECH74115_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3090 
Symbol 
ID6968048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2859500 
End bp2859838 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content51% 
IMG OID643386921 
Producthypothetical protein 
Protein accessionYP_002271389 
Protein GI209396065 
COG category[S] Function unknown 
COG ID[COG5455] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.266132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA AAAATAAGAT GTTGCTGGGT GCGCTTTTGC TGGTTACCAG TGCCGCCTGG 
GCCGCACCAG CCACCGCGGG TTCGACCAAT ACCTCGGGAA TTTCTAAGTA TGAGTTAAGC
AGTTTCATTG CTGACTTTAA GCATTACAAA CCAGGGGACA CCGTACCAGA GATGTACCGT
ACCGATGAGT ACAACATTAA GCAGTGGCAG TTGCGTAACC TGCCCGCGCC GGATGCCGGG
ACGCACTGGA CCTATATGGG TGGCGCGTAC GTGTTGATCA GCGACACCGA CGGTAAAATC
ATTAAAGCCT ACGACGGTGA GATTTTTTAT CATCGCTAA
 
Protein sequence
MTIKNKMLLG ALLLVTSAAW AAPATAGSTN TSGISKYELS SFIADFKHYK PGDTVPEMYR 
TDEYNIKQWQ LRNLPAPDAG THWTYMGGAY VLISDTDGKI IKAYDGEIFY HR